Detailed information of asel_s0021.g72.t1 in Acropora selago

Genomic Location: sc0000021_pilon:1139735...1174774
NR annotation: XP_029188020.2, nuclear pore complex protein Nup98-Nup96-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P49793Nuclear pore complex protein Nup98-Nup96 OS=Rattus norvegicus OX=10116 GN=Nup98 PE=1 SV=2
Q6PFD9Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=2
P52948Nuclear pore complex protein Nup98-Nup96 OS=Homo sapiens OX=9606 GN=NUP98 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21240Nup98_GLEBSNup98, Gle2-binding sequenceDomainInterproscan
PF04096Nucleoporin2Nucleoporin autopeptidaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036903Homologous_superfamilyNuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamilyInterproscan
IPR037665FamilyNucleoporin peptidase S59-likeInterproscan
IPR007230DomainNuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23198NUCLEOPORINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000973Biological Processpost-transcriptional tethering of RNA polymerase II gene DNA at nuclear peripheryInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005643Cellular Componentnuclear poreInterproscan
GO:0006405Biological ProcessRNA export from nucleusInterproscan
GO:0006606Biological Processprotein import into nucleusInterproscan
GO:0008139Molecular Functionnuclear localization sequence bindingInterproscan
GO:0017056Molecular Functionstructural constituent of nuclear poreInterproscan
GO:0034398Biological Processtelomere tethering at nuclear peripheryInterproscan
GO:0044614Cellular Componentnuclear pore cytoplasmic filamentsInterproscan
GO:0006913Biological Processnucleocytoplasmic transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14297NUP98, ADAR2, NUP116; nuclear pore complex protein Nup98-Nup96-Chromosome and associated proteinsko03036deepkoala

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