Gene detail

Detailed information of asel_s0024.g26.t3 in Acropora selago

Genomic Location: sc0000024_pilon:344736...357790
NR annotation: XP_029184437.2, malonyl-CoA-acyl carrier protein transacylase, mitochondrial-like isoform X2 [Acropora millepora]
Species Acropora selago · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

asel_s0024.g26.t3

GTAAAATACAGCAATATTTATTGTAATATGCGCCAGCGAGCGCGTGGAATTCTACATCATTTGGTGAAGAGGTGTCGAAGAGAATTAAGGAGAAATTTTAACACTTGCTTTTTCTTCCCCGGGCAAGGGTCACAGAGTGTTGGAATGTGCAAAATTCTGCTAAAAGAGCCCACCGTTATACAGTTATTTGAGAAGTCCTGTGAGATTTTAGGCTATGATTTGCTGCGCTTATGCTTGGAGGGACCTGTGGAGGAGCTAAATTTGACGCAGAATTGTCAACCTGCAGTGGTTGTGGCATCACTAGCTGCACTGCAGAGTTATTATGCCAAAGATAACAAGGGATTTCCTGATTCGTGGCTGAATGAATCTGATGCACGCACAACAGTCACTGCCGGGTTTAGTGTTGGAGAGATTTCAGCCCTAATATTTTCTGGAGCATTTTCTTTTGAAGATGGTTTAAGGGTAGTACAGGCACGTGCTCAAGCCATGCAAGAAGCTTCTCTTCAAAACCCTGGAAGCATGGTGTCGATTATGGGTCACGAAGAGTTAAATGTTAAGGAGATTTGTGTTGCTGCAATGGACTATTCCTCCAAGAAAGGAACTCAAAAGCCAGTATCCTGCATTGCTAATCATCTGTTCCCAGGTGGATGGGTGTTGGGCGGGGACACATCATCTGTTCAGTACATCCTGGAGTTTGGAAAGGCAAAGCATGGCATTAAGAGAGCTCAGCTAATCCCAGTTAGCGGAGCGTTTCATACTGAACTGATGACGTCTGCACAAGCACCCCTAAGAAAAGTGTTGGATTCTGTGAACATAAGGACACCAAAATGTGTTGTGTACTCTGGAACAAGCTGTGCACCCTTTACTTCTCCTGATATCATTAAAAGATATCTGCATGTTATTGTCCAAGTGATTTATCACAGTTCTTTTCAATTATTGTGTCCTGGAGCCTTTATAACAAAGCATCCACTGAAGCAAATTCGTTTTTGACAGACAATAAAATGTTGAAAGCTATGTTTCTGGTTTCTGCATTTTGCAATTTGCAACCTACGAGGGAACAGTTAAGGATCTTGCCATGAAAGATATGTGACTTGAATTCTATATTCTGGCTTGCTGGAACATCAGCTGGTAGAGCCTATAAATTGGATGAAAACCATCCAAAACATCTTCAAGGAGAATGGTAGTGGCTCAACTATCTATGAAGTGGGCCCTGGAAAACAGTTACGGAGCATGATTTCTCGCATCAATAAATCCCTTATGAATGACTTCAGAAACCTTGGGACGTGACATGAGATTCTACAAGAGCTTGTTTTGATAAAGGAAACCATGGAATTATGAATTGGATGCATTTGGTATTAGGAGTGTGGAGATAATTTTATCTGCTGGAGTGTTTGACATCAAGAGGTCTGAATGAAAGAGCCAGTGTATATTTCCCTCCATGGCACCCAGTTAAATAATGCTAACTTAAGAAAGAACAAAAAAAACAGTTTTTGCATCCTAAAATGTTTTTGAACGTGATTTAGACTGAAGGAAAATCTAAAAGTTAACGCTTCTAGCAACCAACAAATCTTTTGGGAAAATATACGTCTTAAAAAGGAAAGAAACTGCACCTACAGTTTTATTATACTGTGGATTAGCTTGATTGACAGTGGGCTCTGTTCAGCGGAGATGGAAGACCTAATGAACTTGTCAAGAATTTTTCAGATATCAATATCAATAATTGAAGATGCCAGCATAAGATTCTTTCCCTGTTTTTGTTTTTGTCTTTTCATCAGAAAGGAACCTTTTTTTGCCTGAGAGTGGGATCACAAAATGGTTTAACAAGTGTCCAACATTTTCAGTAAGGTTTCAATGCTTCCATTAGGAATAACATTTTCGGTAGTTTTATACTTTGCTATCCGAGAGCCCTTTTTTTTTTGTCTCAGACGGGCCAGTCAAGGAAGTCTCGCAATTTTGTGTATTTAACTATATCCTTGCAATACTTCTGCCCCATTAGCAATAGTCATAACAACCTTAATAGCGGAAACAGCTTAACTTCCACATCAAGGAAAATAAATGATTATTAAGTACAATTATAGCACATAATTACTGTAGACTTAAGCAGATGCAATTGTCTAGACGCTGTGAACCATGTTCTATTTTGTGTGGCGGGTTTTATCATAAAATAAATTTGCCAGGTCATTCATGTTTCTGTCATTTCCTTTGACATAAAAGATTGTAAAGCACAGTCTATTTCTCAAGGAAGTTCATTTGAGAAATGCAAGTGCAACTTTGCTTCAAACATGAATTGTGACTGTAATGCCGACATTGTGAGGTCATCCATGGAATACCGCATTATGATGCACAATGTAAAATAATGATAAAAAATACTCAATAGTCTGTGACAATCTTGCCCCTTGTCCTCAACTTTTTATTAGCCCTTAATTTAGCCATGTGCAGTAATGCACTGTAATTACAGGAATGAAGTCTTGCAATTCAATGATATCCAACTGAAACAATTTTGAAAAACAAATAATGTACTTTTAAAGAAATACTGTCATTTTTCAACTGTATGATTACAAAACAACCAGAGGAAGCTAGCAGATAGAAATCACTGCCTGTGCAAAGTTGAATTTCATGAATTGCAAGAAAGCTGCCTGCCCACAATAGTAGAACTAAATTGAAACAGAATCAACTGATTTACTAGAAAACTATCGAAACTTAGTATCTAAACAATTTTAATAGCATTGCTGGCCTAGCTAAAGTAGGGTGCATCATTCTGATCAGCTCAAGTAGAAAAATTTCAATTTAATTGATCAGCCAAGTTAAACCAGAAGCATGAAGCAAAGATTAGCCAAAAATCACTCTCAACCTCGGTTGGAAAACATGAAAACTTTTCACTCCGAGAGAAACTCTTAGTTCTAGTGTCTAGTTAATCACTTCGTGAAACAAGACTGGTCAAAACAGGAAAAAATTAAACCCCTAATTTTGTAACCTATCAATCTGAAATCTTCCAATTCTTATTTCAGAAAACATGAACATAAATTATACTTTAGAATTATTGGTCCATCTTCACACTCTATTAAGTTATATTGCTAAATATTACTTTTATCGTAAATTTTTGTAAGCTCTCAAATTATCAATTGCAACGAGAAATGTATCCAGTACAACTCACCTTGCTGTTGCTTCTTGTCTTTTCAAATGAAACACGTCATTACTTTGGAACTCCGGGAAAATGGTGTAGTTCTAAGTCTTCTTGGATAAATATCATAAAGTAGAAACTAGCATCACAGAAACTACCTTCCTATGACGAAGACTCTTCGATTTTGCTATATTTCCAATTTGTAGAATAGTTTGAAGATTTTCTTTTTCGCTTCTCGCATCCACGTGCGAGTGGAATATTTACGTCTTGGATAAAAACAATTCATTTCCTACACTTCATTTAGGCTTCGAAAACACGATATGTTGTCGTTTAGAAACTATTTCTGGTTCTGTTTTACAGCTCGAAGAAACCTTAACGTAGCATTTCGCTGCTGCTGACTACGGCCTCCATTTTGCTCCCAGCAAGATGAAAGCTCATCTAATGTTCTATTACGTGGCGTTGTGCGTCCGCTTTGTCAACCAAATATACCTTTTTAGTTGCAATGTTCGCTTTCTGGTTTAACACGTTACTTTAGGCAACACCATGCACTAGTGTTTCTGTTATATTGTGATATGAATCACCTCTTTTTGTCAAACGAAAAGAATATAAGATGGATCTCCCTTGGGAGCCTTCTAAGAAATAAAGCCAAACTATATTGTAGATAAACACTGAAAGCTGGAAAGTGTTTTTTTTTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8R3F5	Malonyl-CoA-acyl carrier protein transacylase, mitochondrial OS=Mus musculus OX=10090 GN=Mcat PE=1 SV=3
Q8IVS2	Malonyl-CoA-acyl carrier protein transacylase, mitochondrial OS=Homo sapiens OX=9606 GN=MCAT PE=1 SV=2
Q8T3L6	Probable malonyl-CoA-acyl carrier protein transacylase, mitochondrial OS=Drosophila melanogaster OX=7227 GN=beg PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003210 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00698 all species →	Acyl_transf_1	Acyl transferase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014043 all species →	Domain	Acyl transferase	Interproscan
IPR016035 all species →	Homologous_superfamily	Acyl transferase/acyl hydrolase/lysophospholipase	Interproscan
IPR052760 all species →	Family	Mitochondrial malonyltransferase	Interproscan
IPR016036 all species →	Homologous_superfamily	Malonyl-CoA ACP transacylase, ACP-binding	Interproscan
IPR001227 all species →	Homologous_superfamily	Acyl transferase domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47170 all species →	MALONYL-COA ACP TRANSACYLASE, ACP-BINDING	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016740 all species →	Molecular Function	transferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for asel_s0024.g26.t3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.