Detailed information of asel_s0031.g34.t1 in Acropora selago

Genomic Location: sc0000031_pilon:508881...510414
NR annotation: XP_029205024.1, 60S ribosomal protein L7-like isoform X1 [Acropora millepora]
Species Acropora selago · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q58DT1Large ribosomal subunit protein uL30 OS=Bos taurus OX=9913 GN=RPL7 PE=2 SV=1
Q4R506Large ribosomal subunit protein uL30 OS=Macaca fascicularis OX=9541 GN=RPL7 PE=2 SV=1
Q5R9R4Large ribosomal subunit protein uL30 OS=Pongo abelii OX=9601 GN=RPL7 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006863 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08079
all species →		Ribosomal_L30_NRibosomal L30 N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012988
all species →		DomainLarge ribosomal subunit protein uL30, N-terminal, eukaryotesInterproscan
IPR039699
all species →		FamilyLarge ribosomal subunit protein uL30Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11524
all species →		60S RIBOSOMAL PROTEIN L7Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000463
all species →		Biological Processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0022625
all species →		Cellular Componentcytosolic large ribosomal subunitInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for asel_s0031.g34.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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