Detailed information of asel_s0033.g22.t1 in Acropora selago

Genomic Location: sc0000033_pilon:206506...256595
NR annotation: XP_029191482.2, serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like isoform X3 [Acropora millepora]
Species Acropora selago · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9JMI9Short transient receptor potential channel 3 OS=Rattus norvegicus OX=10116 GN=Trpc3 PE=2 SV=4
Q9QZC1Short transient receptor potential channel 3 OS=Mus musculus OX=10090 GN=Trpc3 PE=1 SV=2
Q61143Short transient receptor potential channel 6 OS=Mus musculus OX=10090 GN=Trpc6 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001212 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13637
all species →		Ank_4Ankyrin repeats (many copies)RepeatInterproscan
PF00520
all species →		Ion_transIon transport proteinFamilyInterproscan
PF12796
all species →		Ank_2Ankyrin repeats (3 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002110
all species →		RepeatAnkyrin repeatInterproscan
IPR036770
all species →		Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR051165
all species →		FamilyMultifunctional Ankyrin Repeat Domain-Containing ProteinInterproscan
IPR005821
all species →		DomainIon transport domainInterproscan
IPR002153
all species →		FamilyTransient receptor potential channel, canonicalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24123
all species →		ANKYRIN REPEAT-CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005216
all species →		Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811
all species →		Biological Processmonoatomic ion transportInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan
GO:0005262
all species →		Molecular Functioncalcium channel activityInterproscan
GO:0070588
all species →		Biological Processcalcium ion transmembrane transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for asel_s0033.g22.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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