Gene detail

Detailed information of asel_s0034.g51.t2 in Acropora selago

Genomic Location: sc0000034_pilon:449616...456262
NR annotation: XP_029195696.2, LOW QUALITY PROTEIN: aspartyl/asparaginyl beta-hydroxylase-like [Acropora millepora]
Species Acropora selago · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

asel_s0034.g51.t2

CGTATTTTTCTCGCGGCCACGCGCGTAACGTGTAGCAAGTGGCGTGTGGTTATCCCAGAAACAAAACAGAGAAGGAATTATGAATTCGTTGGATGTTAAATAATAATCATTTCCAAAGTTTTCTGCAGATTATGGCCCCTCCTCGCAAGAGACCTACTGGAGATAAAAAGAAGGATGCAGACTCCCCTGAAAAAAAAGCAAAAAGGAAAGATTCTCGTAAAGCAAGTGGAATATCACAATTGAAATGGATTTTTATTGTTTTTGTGACTGTCCTTGTGGCTGTGGCAGCTTTTTTTGTTTTAACATCATTAAACAAACAGGATTCAACTTTGAATCAGAAACCTGAAAAACAGACTGTTGTGGAAGAAAGGGAGACATCAGAAAAGCCAAAGAAGAAAGCTAAGAAAAAAAAGTCGGTTGATCCATTGACGTCAATAACTAACAACTTTGACAAAAGTATATTAAAGGAACTTACTAAAGCTCAAAGTGTTTTGGATAAAGGCCAGATTGAAGATGCTTTGAAAAAATTTGAAGGGCTTGTGAATAAATATCCAAAAAGTCCACTGGCAATGTATGGAAAAGCACAGTCCTTGGATAAACTCTCAGAAATAAGACAAAGCAATGAGATTCTTCAGCAAAGTATACATGCATATGGTAATGTCATAGACTTACCAGACTGTCCATTGCAGCTGAAACATCAAGCAATGCGACAACAAGCCGACAGACTAAGCTTCCTGGGTAAGATTGGACAGGCGATCAGCACATTAAAGAAGTTGCTGAATTTATTTCCACATGACTTGAAACTCATGAATGAAATTGGTGTACAGTATCTTTTGTCGGGGAGAAACAGAGATGCAGAAAATATTTACAATAAGGTAGTAAACATGGATCCAAGTAATGGCTTTGCCAAGTCACATTTGGGCTTCATTATCAAAACTGATCACCTGCGTTACAAAGAAGCAATTCCTTTGCTGCGGGAAGGCATCGCAAGTGGTGAAACTGGAGCAGATGATGGCAGGTTTTACTTCCATTTGGGAGATGCATTCACACGTATTGGAAAACCAGATGAGGCTTACAAAGTGTATGAAGAAGCTGCAAAGAAGGGTATATTCATGTCAGCATTGCAACGATCTCTTTACAATGCTGATACTCCCCTGACAGCACGACCCTGGTGGGCACCAGAACAGACTGGGTATTTAGAAGCCATAAGGAAACTAGAAGGAAACTGGAAGGTGATCAGAGATGAAGGCCTTGAGGTGCTTGACCAGAAATCAGGAGGGTTTATTCCAGAAGAAGAGAACCTACGACAACAGGGAGATTGGAAACAGTTTACTCTTTATCAGCGCGGGAGAAAGAACACAGCAGCTTGTCGTAGGACTCCACGGACATGTGCTATTGTAGATTCAATTGCTGATGCTGCAAGCTGTAAGAGAGGCCAGATAAAGTATTCCGTAATGCTTCCTGGCACACACGTATGGCCACATACTGGTCCTACAAACTGCCGTTTGCGACTACACCTTGGACTTGTTATTCCTAAGAATGTGGCCATCAGGGTGGGGCATGAAACAAGAACATGGAAAGAAGGTAAAGCTATCATTATTGATGACTCATTTGATCATGAAGTCTGGCACAATGGGTCTACATTTAGGCTTATCTTCATTGTGGACTTCTGGCATCCAGATTTAACTCCTCGACAAAGGGCTACCTTAGGACCCATTTAATAATTTTCTATGAAGTTTAGTTCAAGTATTTCAGTTGAAATTACACTAGTTATTGAGTTCATTTGCTGTGTCTATTTCACAAGCTATTTTAGTTATAATAACCTACAATGTAGTTGGTTCTGCCTATAAATATTACTGCCCTCATAATTGAGTGGCACTCCCTCTTCTCCCTGAGTAAGCAGCTGGGAAAAAAAAGAAATATTTGGATCGCTATTGACTGCAGTCAGCTTCTTTTCAAAACCTGGACAGACAAGAGCTACCAAATAATTTCTTTCCTCTCATCTGTAGGTAATATTATCACTTGATAAGTGTATTCTTATTGATAAGATGGAAAACATATATTTCTTCTTTAGACCTTATGTCTAGTTATTTTATAGAAAAAATGAGCAAGAGGTAGTCTTGGAAGATTAGTGAATTTGCTTCTTCAACAAAACAAAGCAAACAGATAGTCACCTCACAAGGACAAAAAATGGTCTCCATTTTAAAACCAACCTTATTCAAATAGGAAAATTAATTCTTATGAAACTTTATTCTTTAGCAACTGACAAAATTTTGACTTTGTTGGATTTTGGATTGATTGAGAAGTTTAAGCCATTTTAGAATTTTATTGCATTTGTTTTGAATAAAAAAGATTGCTTTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BSY0	Aspartyl/asparaginyl beta-hydroxylase OS=Mus musculus OX=10090 GN=Asph PE=1 SV=1
Q12797	Aspartyl/asparaginyl beta-hydroxylase OS=Homo sapiens OX=9606 GN=ASPH PE=1 SV=3
Q28056	Aspartyl/asparaginyl beta-hydroxylase OS=Bos taurus OX=9913 GN=ASPH PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005699 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05118 all species →	Asp_Arg_Hydrox	Aspartyl/Asparaginyl beta-hydroxylase	Domain	Interproscan
PF13432 all species →	TPR_16	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039038 all species →	Family	Aspartyl/asparaginyl beta-hydroxylase family	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR007803 all species →	Domain	Aspartyl/asparaginy/proline hydroxylase	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR027443 all species →	Homologous_superfamily	Isopenicillin N synthase-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12366 all species →	ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0042264 all species →	Biological Process	peptidyl-aspartic acid hydroxylation	Interproscan
GO:0062101 all species →	Molecular Function	peptidyl-aspartic acid 3-dioxygenase activity	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0018193 all species →	Biological Process	peptidyl-amino acid modification	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00476	ASPH; aspartate beta-hydroxylase	EC:1.14.11.16	Cardiac muscle contraction	ko04260	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.