Detailed information of asel_s0041.g47.t1 in Acropora selago

Genomic Location: sc0000041_pilon:628521...631059
NR annotation: XP_029184311.2, ankyrin repeat domain-containing protein 39-like [Acropora millepora]
Species Acropora selago · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q53RE8Ankyrin repeat domain-containing protein 39 OS=Homo sapiens OX=9606 GN=ANKRD39 PE=1 SV=1
Q9D2X0Ankyrin repeat domain-containing protein 39 OS=Mus musculus OX=10090 GN=Ankrd39 PE=1 SV=1
Q0P5B9Ankyrin repeat domain-containing protein 39 OS=Bos taurus OX=9913 GN=ANKRD39 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004256 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13637
all species →
Ank_4Ankyrin repeats (many copies)RepeatInterproscan
PF12796
all species →
Ank_2Ankyrin repeats (3 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002110
all species →
RepeatAnkyrin repeatInterproscan
IPR036770
all species →
Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24171
all species →
ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0004842
all species →
Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0031436
all species →
Cellular ComponentBRCA1-BARD1 complexInterproscan
GO:0070531
all species →
Cellular ComponentBRCA1-A complexInterproscan
GO:0085020
all species →
Biological Processprotein K6-linked ubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for asel_s0041.g47.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP