Detailed information of asel_s0042.g90.t1 in Acropora selago

Genomic Location: sc0000042_pilon:1278140...1291506
NR annotation: XP_029189526.2, histone acetyltransferase KAT6A-like [Acropora millepora]
Species Acropora selago · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8BZ21Histone acetyltransferase KAT6A OS=Mus musculus OX=10090 GN=Kat6a PE=1 SV=2
Q92794Histone acetyltransferase KAT6A OS=Homo sapiens OX=9606 GN=KAT6A PE=1 SV=2
Q5TKR9Histone acetyltransferase KAT6A OS=Rattus norvegicus OX=10116 GN=Kat6a PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006242 (this species only)
Ubiquitin familyE3|E3 activity RING|PHD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21524
all species →
SAMD1_WHSAM domain-containing protein 1, WH domainDomainInterproscan
PF00628
all species →
PHDPHD-fingerDomainInterproscan
PF00538
all species →
Linker_histonelinker histone H1 and H5 familyDomainInterproscan
PF00536
all species →
SAM_1SAM domain (Sterile alpha motif)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036390
all species →
Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR048589
all species →
DomainSAM domain-containing protein 1-like, WH domainInterproscan
IPR001660
all species →
DomainSterile alpha motif domainInterproscan
IPR001965
all species →
DomainZinc finger, PHD-typeInterproscan
IPR013761
all species →
Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019787
all species →
DomainZinc finger, PHD-fingerInterproscan
IPR005818
all species →
DomainLinker histone H1/H5, domain H15Interproscan
IPR011011
all species →
Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR050548
all species →
FamilyPolycomb group and chromatin remodeling factorsInterproscan
IPR036388
all species →
Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12247
all species →
POLYCOMB GROUP PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0000786
all species →
Cellular ComponentnucleosomeInterproscan
GO:0006334
all species →
Biological Processnucleosome assemblyInterproscan
GO:0003682
all species →
Molecular Functionchromatin bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0042393
all species →
Molecular Functionhistone bindingInterproscan
GO:0045892
all species →
Biological Processnegative regulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for asel_s0042.g90.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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