Gene detail

Detailed information of asel_s0048.g19.t1 in Acropora selago

Genomic Location: sc0000048_pilon:213486...221379
NR annotation: XP_044182481.1, protein DENND6A-like [Acropora millepora]
Species Acropora selago · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

asel_s0048.g19.t1

tacgtacctaatgacattttTAAGTAAATTGACTTTTACTGATTGATTTTGACGCATTAGGTGCGTATACCATCCAGAGGGGATAAACCCGGAGCTGTGTCTTCACCGGACAATCCACTTGTTCCTCAAATTGTACCCCAAATGCCGTCGCCAAAAGTGATTCCTACTTTAAAGGATCCAGATATATTTAGATGTCTTCAACCCATTCTTCCGCATATTCATCTTTTGTGGGAATTGGTTCTGACAAATGAGCCTATCGTTGTTATGGCTCCATCTCCCACAGTCTGTTCAGAGACAGTTCAAGCGCTGGCAAGTTTGATTTCTCCTCTTCACTATTGCTCCGACTTCAGACCTTTCTTCACAATTCATGACACGGAATTCAAAGAATACACAACGCGGACACAAGCCCCACCTGGTGTAATTCTTGGAGTTACTAATCCTTTTTTTGCGAAAACGCTCCAACACTGGCCGCACATGGTGCGGATTGGAGAAATGGCAAACCTTGTTGTGACGTCAAGAAGATCGCCCGTTATCGGTCACAATCCCAAAAAGACGTTGTCATCCAAGCCAGGTATCTACACGAAGTACAAGCAGTTATTAGCGAAGGATAAACTGATTTTTAGACGGTTAAGTAAGGGAAACCATCCAAAGAGACCACCTGAAGTCCAGAATGCCATATTGAGGAGACACATGGTGGAGCTAACACAAAGCTTTATGATTCCGTTGGAGAGATATGTGGCTAGCCTTATGCCGTTACAAAAAAGCATCTCACCCTGGAAGCGTCCTCCGAGATTAAGACCTTTCGATGCTGAAGAATTTCTTACGACCCTCGAGCATTCTGGACCCCAGCTGACGTCCCGACTCAAGGGAAACTGGGTCGCACTTTATAGGAAATTTTTCAAGTCCGCAAACTTTGAAGGTTGGCTTCGCCAACGGCGACAAGAGATCAGACAAAAGCTTGAACTTCTGCATCTTGAAGCGCTGGGAAAAGCAGATGTTTCTTTGTGGATCAAAGACAAACAGGAAGTGGAAATAGTTGATTTGTTTCTGCAGATAAAAGAAAAGCTGGCTGGCTCAGTCTCGTTTTACCCTCCTGTTGGTCACGATGTCAAACAACAGTTGAAAGCTCACCTAACAACCATAACAGACAATCTTCCCGTGGATTTGCAGTTTGTTTTGAAGAACAGTTGACGAATGGGATGAGATATAAGTAACTTAATGCAATGAAATCTGTAAACATAGAACTATTTCTTGACGACATCGAAAAGGAAATTTGAAGGAAACTCTGAGTAGtttccaattcttcaagagcaaagcaacaaagtcgaggattatggaagaagttttcttttcttctcttttatgaacaaaaggaaatgcgaattattactcggaacctctacaccggctttgctccctgtacggttcgaGAAGAGCTGCGACCGCAAACCGGTGCAAAAATATTCCTTAATAATTCTTAGCATTTTAAGCTTGGAAATTTCAATTTTAAACCCCATAGTTAATGTTCCGCCTTGCTTGTGAATATTTCTCTGTTGAATTGAAGTGCCTCGATATGTCTTTTGAAACTGGATCTTTGCATGAAGTAAGACTGCATAGTTCTGAAATTCTGAAAAGGGTAGCCTCAACGCTTTTTATAGAGTGCGGTTAATCTGAAGTCAAAGTGGTACTTTTGGCCAATCATAGCTTCGACCTGTGAAAAGAGCGGGACAACACGTGAATGCAAGGCATATTTGATTTTTCTTATTGGCTGCCACATTATTGCGGCAAAACTTATCATGATGACTTGATTCTCCTGGTACCATTTTTGGGAAGTCACGCGAAAGATCGTGGCGTGACGCTACAGAGACAGAGTCACTCTTTGCAAGTTCCAGTCTTCGCCTCCCAGATTACAGAGTTCGCCTCATCGTCTTATTTTGATTTGTCGTCACGACTATGCCAAACAACAGGATTAATCTGAATTTCATTGCTATCAAGGAGGACAGACCAATTCAAATCCTAAAGAGGGAATTTTATTATATTTATGGAAAACTCAAGCTCTAAATTTATTTTGTGAACGTTTCACGCTAAGAGGTTCCGTGAGTTGAGGTCACGTTATCATTTGTAGGTCCGTGTAGCGTGCAGACAACAATACATTTTTCACGGGTGTTGAAAAAATCTGTCAGTCACACGGCGACTAGGCATTGAAACCAAGTTAATGGTAAATTCGGCGTTAGCTCCAAGGTAGCGCGTCTGGTTTTCCATTTACATCAGCAAAGAGAAGAAAGTTTGTGACTTTGACTTCTTGCCTCTTCCAGAAAGGATTTAATTTTCTGTAAATAGGTTACAAAGTTTATTTTTATATTCTTAAATGTTTATGGCCGAAGTGGGAGGGTGATGTGATGCCCGACGAAATTGTGAATTATTTCACAGAATTAAATTGAAACGTTTTTC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8IWF6	Protein DENND6A OS=Homo sapiens OX=9606 GN=DENND6A PE=1 SV=1
Q8BH65	Protein DENND6A OS=Mus musculus OX=10090 GN=Dennd6a PE=1 SV=1
Q8NEG7	Protein DENND6B OS=Homo sapiens OX=9606 GN=DENND6B PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004633 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08616 all species →	SPA	Stabilization of polarity axis	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024224 all species →	Family	DENND6	Interproscan
IPR043153 all species →	Homologous_superfamily	DENN domain, C-terminal lobe	Interproscan
IPR037516 all species →	Domain	Tripartite DENN domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13677 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0055037 all species →	Cellular Component	recycling endosome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for asel_s0048.g19.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.