Gene detail

Detailed information of asel_s0049.g2.t2 in Acropora selago

Genomic Location: sc0000049_pilon:29992...65855
NR annotation: XP_029187317.2, chromodomain-helicase-DNA-binding protein 4-like isoform X5 [Acropora millepora]
Species Acropora selago · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

asel_s0049.g2.t2

ATGTCCTCTAGCAGCAGTAGAAAGAAAGAATTTCAGTCGTCCGTTGACGGCTCAAATGATGCTGACTCTGAGAAGCCACAATCAAAGAAAAGGAGAACAGAGGAATCAGTGGTTTCTTCAACAGTTGAAAATGGAAAGAAAAGGAAAAGGGACGATGAAAATGAACATGAAACTGCAATGAAGGACAATGAACAGTCTTCTTCAAAGAAACAAAACATCACACGTGATGAAGATCCTGTTGCTCGTAATGGCAATGAAGAAAGTACCAAAGAGGAAGAAATATCTAAGGCAGAATCAGTAGCAAAGGATCTTCATTTGAAGAATATTGAAGTGAAAATCTCAGAAGAGAATGAACAAGGAATGACTTATCTTAAATTTAGTAAGCTGGTGAGGTATCTGATTGTTGAAGCCAACCCGTCTTCTGCACACACTAAAATCAACGCCCTCCTTGGGGCATTGTGGTATGATTATAAGAAGAAAAAATCTTTGGGTGTTGCATCCTCTAATTCTGCAAGTGTCAAAGGTGGTAACAAAGGGAAGAAGCAGAAAACCACGCCTAAAGCAGTAAAGTCAACGAAACCAAAGGAGGCAGTCGAGATCGTTTCTGATGGTGAAGAGTCTGATCCTGATTCAGCTATTGATGATGATGATGATGATGCTGTCATTGGTGAGTCACAAGCTGAAACTAAGTCAAGGACAAAGATCAAGCTGGTTTTTAAGTCAAAGAAAGGAGCTAAAGGGGACCGGAAATTAAAACTCTTGGATGACGATAGTGACCGAGCAAGTGAGACTAGTTCTGGGAGCAGGTCACGAAAAAGCAATGGCAAATCAAAAGGGAAAAATAAATCCAGCAAGAAGAAAATTGATTTAGCTGATGAGGATAGTGATACAAGTCAAGCTAGTGGAAAAAACAAGAAAAAGGCTGGGAAAAGTAAAGGGAAAAGAGAAAAGATTGTCATCAACAAAAAGGGAAAGAAGGACAGGAAGAAAAAAGCAGGAAATGATGATTACAATGTTGTTAGTGTGGATGAACATCAAGATTATTGTGAGGAGTGTGAAGAAGGTGGAGGCCTGCTGCTATGTGACACTTGCACTCTGTCATTTCACTTGAGATGTCTTGATCCTCCACTTGATGAACCACCACAGGGACGCTGGAGTTGTCCTGTTTGTGAAGATGAAATGACAAGTGACTCCAGTGAAGACATGCACAGCGATTACTGCCGAGTGTGCAAAGATGGTGGGCAGCTGTTGTGTTGTGATAGCTGCCCATCAGCATATCATCTGCACTGCCTGATTCCACCCATGAAAAAGATACCTGGTGGGGATTGGAGATGTCCTCGATGCAAGAGTGAGCCACTCAAAGGCAAAGTTGAGAGAATTCTCCACTGGAGATATGTTACTCTCCCAGTTGAAGATCTTCTTGTTGAAAGGGATGAACTTAGTGAGCCAGAGACATATGAAACTAGGGAATTCTTTGTCAAGTGGCTAGACATGTCATACTGGCATTGTTCTTGGATCACAGAGCTTCAGCTGGAAATTCATCATCCCAGCATGTACCGAGCCTACTTCCGTAAGAATGACATGGAAGAACCGCCGCCGGTAGATGATGGAGATGAAGACAAGGAGACTCCAGCTCATGTCATCCAAAGCACTGAGGCTGAGGATGAAAGCAATCTAGAGGCTAGGTTTTACAGATATGGTGTACGACCAGAATGGCTCCAGATTTATCGCATCCTGAGACACAGGGTCACAAAACAATCTAAAGAAGAATATTTAATTAAATGGAGGGATGTTCCATACAATCTTAGCACCTGGGAAGATCCTGAAGATCATAATAATTTTCAAATCAGTGACTTCAAGGATCACATTGCAAAGTACAAGGAACTCAGAGAAACCTATGACAAGAAGTTTGTCAATAAGAAAAAAAGCAACAAGCAAAAAAAATTGAAGAAAACAGTACCTGCTTGTGACCCACGGGATAAATATGAAGAGCAGCCAGAGTTCATTTCAGCTTGTGGAGGAAAGTTGCATGAGTATCAAATGGAAGGATTGAACTGGCTGCGGTTCTCTTGGGCACAGGGAACCAACACTATCCTGGCTGATGAAATGGGACTTGGAAAAACCATTCAGACCATTGTATTCTTGTATTCACTTTGGAAAGAGGGTCATTCCCAAGGTCCCTTTCTAATCAGTGCTCCGTTGTCGACAATTATTAACTGGGAGAGAGAATTTGAATTCTGGGCTCCAGACATGTACGTTGTTACCTATGCTGGTGATAAACTTGCTAGGGCAACCATCAGGAATCATGACTTCTCATTTGATGAAGAAGCTGTTAAAACTGGTCTGAAACCACATAAATTTAAGAAGGATCACCCAGTTAAGTTTCAAGCGCTGTTAACATCTTACGAACTTGTGTCAATTGACATGACTACACTTCAGTCTATTGACTGGGCAGTTTTGGTGGTGGATGAGGCCCACAGACTTAAGAATAAACAATCAAAGTTTTTCCAGATTCTCAGTGCATATTCCATTGATTATAAGCTGCTATTAACAGGGACACCTCTTCAAAACAATCTTGAGGAACTGTGGAATCTCTTGAATTTCTTGGATCCTGTTGAGTTCAAGAATCAAAATACCTTCCTGACAGAGTTTGAGGATGTGGCTAAAGAAGACCAGATCAAAAAGCTTCATGACATTTTGGGGCCTCACATGCTACGACGTCTAAAAGCTGATGTCTTAAAAGGAATTCCCTCCAAGAGTGAACTGATTGTCAGAGTTGAACTAAGTCCACAACAAAAGAAATACTACAAGTACATTTTAACAAGGAATTTTGAGGCTCTGAATACAAAAGGGTCTCACCAAGTATCTTTGCTGAATGTGATGATGGAGCTTAAGAAGTGTTGCAACCATCCTTACCTGTTCTCATCAGCGGCTCTGGAAGCTCCAAGGGGTCCAAGTGGAAACTTTGAGGCTGCAGCCCTTACACGTGCATCTGGAAAGCTTGTTCTTTTGGAAAAAATGTTGAAGAAATTACGGGAACAAGGTCATAGAGTTCTAATCTTCTCTCAGATGACGAGGATGTTGGATCTATTGGAGGACTTCCTTGAAGGACACGGCTACAAGTACGAGAGAATTGATGGAACTGTTAATGGATCAGCCAGGCAGGAGTGCATTGATAGGTTTAATGCTACTGGTGCCCAGACATTTTGTTTCTTATTGTCAACTCGAGCTGGAGGGCTTGGAATCAACTTGGCCACTGCAGACACTGTGTTTATTTATGATTCTGACTGGAATCCTCATAATGACATACAGGCATTTAGTAGAGCCCATAGGATTGGTCAAAACAATAAGGTCATGATTTATCGCTTTGTTACAAGGGCAAGTGTAGAAGAACGCATTACTCAGGTGGCCAAAAAGAAAATGATGTTAACTCACCTTGTGGTCAGACCAGGTTTGGGATCCAACAAGTCAGCTGTGATGTCTAAGAGTGAACTTAACGATATTCTTAGGTTTGGAACACAAGAACTCTTTAAGGACGACAATGCTAAAGATGGAGATTCTGGCGACTCTGGCCGTATAGATTATGATGAAAGAGCTATCTTGTCTTTGTTGGATCGTACAAGTAGCCACGATGATGCACCTGATGATGAGAAAGACATCATGGCAAATGAATACCTTGCTTCCTTTAAGGTTGCAAGCTATGTGGTCAAGGAGAAGGATGACGATGTTGAAGTCCTTAAGCAAGATGCTGAGGCCGCAGATCCTGATTATTGGGAAAAACTGTTGCGTCATCATTATGAACAGTTCCAAGAAGACGAAGCCAGGCATCTTGGGAAGGGAAAGAGAATTAGAAAACAGGTGAGCTATGTTGATGGTGGCATGGAGGACCAAGAGGAATCAGCTTGGACGAATAATTTATCCGACTTTGAAGACGATGGATACAGCGATGTGGAGGAAGAGGAATCAGATGAGGAGTTTAACCAAAAGTCTGAAGGGCGTCAAAGGAGGGGCGGACGAGGTGCTTCTGATAAAGAAGTTACACCTCCTTTGCTGGCCAAAGTTCAGGGCAACTTGGAGGTGTATGGCTTTAACATGCGGCAACGCAAAGCATTCTTAAATGCTATCATGAGATACGGCCTGCCCTCCCCCCAAGGGTCGCGGCGATCACAGTGGTTTGCAAGAGATCTTCGTGGCAAGTCTGAAAAAGCCTTTCAAGCTTATGTGGCCATGTTTTTGCGTCACTTGTGTGAGCCTGGGACGGATAACAGAGAGACATTTAATGATGGCGTGCCGCGCGAGGGATTACAGCGAACTCAAGTATTAACCAGGATCGGTATCATGAGCCTCATCAGAAGAAAGGTGGAAGAATTTGCTCATATCAACGGCTGGGAAGCTTATCCCGATGAAGATACTACGTCTGAAAAACCCTCTAGTAAGACATCATCACGTGTATCCACGCCCATTGCAGAGGTTGACGGTAAGAAGGTTGAACAAGAGCTAACTAAAATAGAATCAAAAGCAGAGACGACTACGGAAAAGAAAGAGGAAACAGACGACAGATCCGAGCGGATGGATTCTGAAAATGTTGAAGCAGTCAAACCTGAATCCAGTAAGGAGAATAAAGATACAGTGAAGCAAGAAAACGACAAACAAGCTAGTTCTTCTGCAGAGAATGGCGATGGAAACAATCAAGGAAAGGATCAGCATGAAACTTATCTCCATGATGGAGGAGATAAAATTAGTGAGGAGACCAATATGGAAGTAGAATTGTCTAGCGAAAAGGAGGATGTGGCGAAAGAAAAGGAGGAGGAAGGTGACAGAAAGAATGAAACTGAGTCCATGGATGTTGATCAAAGCGCAGAAAAAACAGTTGATGAGCAAAAAACGGAGCAGAAAGAGGAGACAGGTGATGAGGAGAAGTCGACTGTCGAAAAGAAAGACAATAATGCAGCAAAAACGGAGGAAAATGAAAACGACGTGACAATGGGCACCGACAGTGGAAAGGAAGATAAGCAAACTACAAAGGACGAAGTATCTGGAAAATCTGAAGAATTAGTTGAAGAATGTAATAAGTCGGCCAATGATGAGGAGTTGGAGAACACAGAAAAGAAGCATGGAGAAACCACTGAAGACAGAGAGAAACAAACAGAACAAACCGAAAAAGGTGACTCCAGTAAGAATGTTTCTGACAAAACAGACTCTGATATGAAAGATCAATCACCATCGGCTGGTGACGATACTTCAGGTCAGAAACCCGAAGAGAAGGCGGCGCCTGGAAAACCCGAAGGGTCTGTTAAGGCAGAACAAGAAACAACAGAATCTGAACCTGCAGGTAGTATCAAACATGAAAAAACCAACGAAGAAAAGAACACAGTGGCAAAGAAGTCCATTGGCTCGGACGCCTTAGCGCAACGTCGCTTTGTATTCAACATTGCCGATGGGGGATTTACTGAACTACACACTTTGTGGGAGGTGGAGGAAAAGCGAAAATGTGATGACATCTGGTGGAGATCTCACGACTACTGGCTGCTGGCCGGAGTTGTTACTCATGGCTATGGTCGGTGGCAAGACATTGCTAATGATCGCAAGTTTGGAGTCGTCAACGAGCCTTTCAAGAATGTTTCTCTTGAGTACAAGAACCGTTTCATTGCACGACGCTTCAAGTTATTAGAACAGGCTCTTGTGATTGAGGAACAGTTGCGAAGAGCTGACAGTATGAAACTCAGACAAGATGCCAACCATCCTGCAATGGCACTCAATGCACGATTTGCAGAACTGGAGTGTTTGGCAGAAAGTCATCAGCATTTATCTAAGGAATCTTTGGCTGGAAACAAGCCTGCCAATGCTGTACTTCATAAAGTTTTAAACCAGTTGGAGGAGTTGTTATCTGACATGAAATCTGATGTTAATCGCTTACCATCGGCGCTGGTCAGAATGCCTCCTGTTACAGCGCGGCTTAACATGTCTGAAAGAGGAATCCTAAGTCGATTGACTAAACGTGGCGAGGGACCATCTCCCAATGTAACAGTAACTGGAAGCCTGGTTCAGTCTGCGCCAATTCCTGGAGTGAGTACAGTCACTATTCAACCGAAAATGCAACCCTTGCTTTTGGGTTCCAACACAATTATGCCATCATTAAATGCCAAAGCCAGACCCCTCAATTTCACCTCTCCGCCCGTGATGTACTACCCAGCCCCAGTAACAGGCAATACTGCTACCATCACAGTGCGACCTCCTCCACCGACAACGCTGCTTCTACCCTCTTCCACCTCGGTAGCAAGCCTGCCAAAACCAGGACCCATAATGACGGTAACCAATCCCAGCTCTTCAATGATCAGTCATCATGCGAACTTACCAACACCTGCTCAGTACGTTACTGCAGTGATAACCAAGCCAACTGTTACGGGGGCTTTACCTGTACCTCAGGTGATGCCGCCCACTCCTGCAACCACTGCTCCAGTGCTCACTCCTGTAATCAACAGTGTGTTCAGTCTGAGCGCCGGTAAAAGTGGAACTGAGTCTCCTCGCAGCTCTACTCCGCCTGTCATCCAAGGGAGTCTTGGGAAAATGCTTAGCAAGTCAGCTTCAGCGTTGGTGGAAAATCAGATCTCCTCTATTATACGCAGTAAGGCTTCGGCTATGGGTCTGATCAAACCTGATACTTCCTCTAACCCCGGCTCTCCAAAAGTAACTGAAGCACGTGTTTCTTCGCCTTCCCTGGGTCCAGCAGCACCCCAGGCCCCGCCAGCTGAATCAGGTCAAACTCAAACACCAGTCACTGGAGACAAGGCAGAAGGTGCTGACCCAGATGTAATTTGCTTGGATTGA

Transcript

asel_s0049.g2.t2

TCTAAAGAAAAACAGTAAGTTTTGTTTTTATCCTCATTCGACACAATCTTCTTTTATTTATGTTGCAATTTTAGGTGAAGCATACCCGCCTCTTTGCGCACGGCCGGTCAAATATCATATTCTCTCAACAGTACTCTCGTTCTTGTCGGCGCCAAAGGCAGCTGCGCCAGTGGCAATCGCCATCTTTGAGAAACCGGGTATTTGGTCTTCAATTTTCATTTCTTATTTTAGACAGTAACAATCTTTCACAGCTACATCGACTAGCTTGGGTCTTCAGGCATGAACGAAAATGTCCTCTAGCAGCAGTAGAAAGAAAGAATTTCAGTCGTCCGTTGACGGCTCAAATGATGCTGACTCTGAGAAGCCACAATCAAAGAAAAGGAGAACAGAGGAATCAGTGGTTTCTTCAACAGTTGAAAATGGAAAGAAAAGGAAAAGGGACGATGAAAATGAACATGAAACTGCAATGAAGGACAATGAACAGTCTTCTTCAAAGAAACAAAACATCACACGTGATGAAGATCCTGTTGCTCGTAATGGCAATGAAGAAAGTACCAAAGAGGAAGAAATATCTAAGGCAGAATCAGTAGCAAAGGATCTTCATTTGAAGAATATTGAAGTGAAAATCTCAGAAGAGAATGAACAAGGAATGACTTATCTTAAATTTAGTAAGCTGGTGAGGTATCTGATTGTTGAAGCCAACCCGTCTTCTGCACACACTAAAATCAACGCCCTCCTTGGGGCATTGTGGTATGATTATAAGAAGAAAAAATCTTTGGGTGTTGCATCCTCTAATTCTGCAAGTGTCAAAGGTGGTAACAAAGGGAAGAAGCAGAAAACCACGCCTAAAGCAGTAAAGTCAACGAAACCAAAGGAGGCAGTCGAGATCGTTTCTGATGGTGAAGAGTCTGATCCTGATTCAGCTATTGATGATGATGATGATGATGCTGTCATTGGTGAGTCACAAGCTGAAACTAAGTCAAGGACAAAGATCAAGCTGGTTTTTAAGTCAAAGAAAGGAGCTAAAGGGGACCGGAAATTAAAACTCTTGGATGACGATAGTGACCGAGCAAGTGAGACTAGTTCTGGGAGCAGGTCACGAAAAAGCAATGGCAAATCAAAAGGGAAAAATAAATCCAGCAAGAAGAAAATTGATTTAGCTGATGAGGATAGTGATACAAGTCAAGCTAGTGGAAAAAACAAGAAAAAGGCTGGGAAAAGTAAAGGGAAAAGAGAAAAGATTGTCATCAACAAAAAGGGAAAGAAGGACAGGAAGAAAAAAGCAGGAAATGATGATTACAATGTTGTTAGTGTGGATGAACATCAAGATTATTGTGAGGAGTGTGAAGAAGGTGGAGGCCTGCTGCTATGTGACACTTGCACTCTGTCATTTCACTTGAGATGTCTTGATCCTCCACTTGATGAACCACCACAGGGACGCTGGAGTTGTCCTGTTTGTGAAGATGAAATGACAAGTGACTCCAGTGAAGACATGCACAGCGATTACTGCCGAGTGTGCAAAGATGGTGGGCAGCTGTTGTGTTGTGATAGCTGCCCATCAGCATATCATCTGCACTGCCTGATTCCACCCATGAAAAAGATACCTGGTGGGGATTGGAGATGTCCTCGATGCAAGAGTGAGCCACTCAAAGGCAAAGTTGAGAGAATTCTCCACTGGAGATATGTTACTCTCCCAGTTGAAGATCTTCTTGTTGAAAGGGATGAACTTAGTGAGCCAGAGACATATGAAACTAGGGAATTCTTTGTCAAGTGGCTAGACATGTCATACTGGCATTGTTCTTGGATCACAGAGCTTCAGCTGGAAATTCATCATCCCAGCATGTACCGAGCCTACTTCCGTAAGAATGACATGGAAGAACCGCCGCCGGTAGATGATGGAGATGAAGACAAGGAGACTCCAGCTCATGTCATCCAAAGCACTGAGGCTGAGGATGAAAGCAATCTAGAGGCTAGGTTTTACAGATATGGTGTACGACCAGAATGGCTCCAGATTTATCGCATCCTGAGACACAGGGTCACAAAACAATCTAAAGAAGAATATTTAATTAAATGGAGGGATGTTCCATACAATCTTAGCACCTGGGAAGATCCTGAAGATCATAATAATTTTCAAATCAGTGACTTCAAGGATCACATTGCAAAGTACAAGGAACTCAGAGAAACCTATGACAAGAAGTTTGTCAATAAGAAAAAAAGCAACAAGCAAAAAAAATTGAAGAAAACAGTACCTGCTTGTGACCCACGGGATAAATATGAAGAGCAGCCAGAGTTCATTTCAGCTTGTGGAGGAAAGTTGCATGAGTATCAAATGGAAGGATTGAACTGGCTGCGGTTCTCTTGGGCACAGGGAACCAACACTATCCTGGCTGATGAAATGGGACTTGGAAAAACCATTCAGACCATTGTATTCTTGTATTCACTTTGGAAAGAGGGTCATTCCCAAGGTCCCTTTCTAATCAGTGCTCCGTTGTCGACAATTATTAACTGGGAGAGAGAATTTGAATTCTGGGCTCCAGACATGTACGTTGTTACCTATGCTGGTGATAAACTTGCTAGGGCAACCATCAGGAATCATGACTTCTCATTTGATGAAGAAGCTGTTAAAACTGGTCTGAAACCACATAAATTTAAGAAGGATCACCCAGTTAAGTTTCAAGCGCTGTTAACATCTTACGAACTTGTGTCAATTGACATGACTACACTTCAGTCTATTGACTGGGCAGTTTTGGTGGTGGATGAGGCCCACAGACTTAAGAATAAACAATCAAAGTTTTTCCAGATTCTCAGTGCATATTCCATTGATTATAAGCTGCTATTAACAGGGACACCTCTTCAAAACAATCTTGAGGAACTGTGGAATCTCTTGAATTTCTTGGATCCTGTTGAGTTCAAGAATCAAAATACCTTCCTGACAGAGTTTGAGGATGTGGCTAAAGAAGACCAGATCAAAAAGCTTCATGACATTTTGGGGCCTCACATGCTACGACGTCTAAAAGCTGATGTCTTAAAAGGAATTCCCTCCAAGAGTGAACTGATTGTCAGAGTTGAACTAAGTCCACAACAAAAGAAATACTACAAGTACATTTTAACAAGGAATTTTGAGGCTCTGAATACAAAAGGGTCTCACCAAGTATCTTTGCTGAATGTGATGATGGAGCTTAAGAAGTGTTGCAACCATCCTTACCTGTTCTCATCAGCGGCTCTGGAAGCTCCAAGGGGTCCAAGTGGAAACTTTGAGGCTGCAGCCCTTACACGTGCATCTGGAAAGCTTGTTCTTTTGGAAAAAATGTTGAAGAAATTACGGGAACAAGGTCATAGAGTTCTAATCTTCTCTCAGATGACGAGGATGTTGGATCTATTGGAGGACTTCCTTGAAGGACACGGCTACAAGTACGAGAGAATTGATGGAACTGTTAATGGATCAGCCAGGCAGGAGTGCATTGATAGGTTTAATGCTACTGGTGCCCAGACATTTTGTTTCTTATTGTCAACTCGAGCTGGAGGGCTTGGAATCAACTTGGCCACTGCAGACACTGTGTTTATTTATGATTCTGACTGGAATCCTCATAATGACATACAGGCATTTAGTAGAGCCCATAGGATTGGTCAAAACAATAAGGTCATGATTTATCGCTTTGTTACAAGGGCAAGTGTAGAAGAACGCATTACTCAGGTGGCCAAAAAGAAAATGATGTTAACTCACCTTGTGGTCAGACCAGGTTTGGGATCCAACAAGTCAGCTGTGATGTCTAAGAGTGAACTTAACGATATTCTTAGGTTTGGAACACAAGAACTCTTTAAGGACGACAATGCTAAAGATGGAGATTCTGGCGACTCTGGCCGTATAGATTATGATGAAAGAGCTATCTTGTCTTTGTTGGATCGTACAAGTAGCCACGATGATGCACCTGATGATGAGAAAGACATCATGGCAAATGAATACCTTGCTTCCTTTAAGGTTGCAAGCTATGTGGTCAAGGAGAAGGATGACGATGTTGAAGTCCTTAAGCAAGATGCTGAGGCCGCAGATCCTGATTATTGGGAAAAACTGTTGCGTCATCATTATGAACAGTTCCAAGAAGACGAAGCCAGGCATCTTGGGAAGGGAAAGAGAATTAGAAAACAGGTGAGCTATGTTGATGGTGGCATGGAGGACCAAGAGGAATCAGCTTGGACGAATAATTTATCCGACTTTGAAGACGATGGATACAGCGATGTGGAGGAAGAGGAATCAGATGAGGAGTTTAACCAAAAGTCTGAAGGGCGTCAAAGGAGGGGCGGACGAGGTGCTTCTGATAAAGAAGTTACACCTCCTTTGCTGGCCAAAGTTCAGGGCAACTTGGAGGTGTATGGCTTTAACATGCGGCAACGCAAAGCATTCTTAAATGCTATCATGAGATACGGCCTGCCCTCCCCCCAAGGGTCGCGGCGATCACAGTGGTTTGCAAGAGATCTTCGTGGCAAGTCTGAAAAAGCCTTTCAAGCTTATGTGGCCATGTTTTTGCGTCACTTGTGTGAGCCTGGGACGGATAACAGAGAGACATTTAATGATGGCGTGCCGCGCGAGGGATTACAGCGAACTCAAGTATTAACCAGGATCGGTATCATGAGCCTCATCAGAAGAAAGGTGGAAGAATTTGCTCATATCAACGGCTGGGAAGCTTATCCCGATGAAGATACTACGTCTGAAAAACCCTCTAGTAAGACATCATCACGTGTATCCACGCCCATTGCAGAGGTTGACGGTAAGAAGGTTGAACAAGAGCTAACTAAAATAGAATCAAAAGCAGAGACGACTACGGAAAAGAAAGAGGAAACAGACGACAGATCCGAGCGGATGGATTCTGAAAATGTTGAAGCAGTCAAACCTGAATCCAGTAAGGAGAATAAAGATACAGTGAAGCAAGAAAACGACAAACAAGCTAGTTCTTCTGCAGAGAATGGCGATGGAAACAATCAAGGAAAGGATCAGCATGAAACTTATCTCCATGATGGAGGAGATAAAATTAGTGAGGAGACCAATATGGAAGTAGAATTGTCTAGCGAAAAGGAGGATGTGGCGAAAGAAAAGGAGGAGGAAGGTGACAGAAAGAATGAAACTGAGTCCATGGATGTTGATCAAAGCGCAGAAAAAACAGTTGATGAGCAAAAAACGGAGCAGAAAGAGGAGACAGGTGATGAGGAGAAGTCGACTGTCGAAAAGAAAGACAATAATGCAGCAAAAACGGAGGAAAATGAAAACGACGTGACAATGGGCACCGACAGTGGAAAGGAAGATAAGCAAACTACAAAGGACGAAGTATCTGGAAAATCTGAAGAATTAGTTGAAGAATGTAATAAGTCGGCCAATGATGAGGAGTTGGAGAACACAGAAAAGAAGCATGGAGAAACCACTGAAGACAGAGAGAAACAAACAGAACAAACCGAAAAAGGTGACTCCAGTAAGAATGTTTCTGACAAAACAGACTCTGATATGAAAGATCAATCACCATCGGCTGGTGACGATACTTCAGGTCAGAAACCCGAAGAGAAGGCGGCGCCTGGAAAACCCGAAGGGTCTGTTAAGGCAGAACAAGAAACAACAGAATCTGAACCTGCAGGTAGTATCAAACATGAAAAAACCAACGAAGAAAAGAACACAGTGGCAAAGAAGTCCATTGGCTCGGACGCCTTAGCGCAACGTCGCTTTGTATTCAACATTGCCGATGGGGGATTTACTGAACTACACACTTTGTGGGAGGTGGAGGAAAAGCGAAAATGTGATGACATCTGGTGGAGATCTCACGACTACTGGCTGCTGGCCGGAGTTGTTACTCATGGCTATGGTCGGTGGCAAGACATTGCTAATGATCGCAAGTTTGGAGTCGTCAACGAGCCTTTCAAGAATGTTTCTCTTGAGTACAAGAACCGTTTCATTGCACGACGCTTCAAGTTATTAGAACAGGCTCTTGTGATTGAGGAACAGTTGCGAAGAGCTGACAGTATGAAACTCAGACAAGATGCCAACCATCCTGCAATGGCACTCAATGCACGATTTGCAGAACTGGAGTGTTTGGCAGAAAGTCATCAGCATTTATCTAAGGAATCTTTGGCTGGAAACAAGCCTGCCAATGCTGTACTTCATAAAGTTTTAAACCAGTTGGAGGAGTTGTTATCTGACATGAAATCTGATGTTAATCGCTTACCATCGGCGCTGGTCAGAATGCCTCCTGTTACAGCGCGGCTTAACATGTCTGAAAGAGGAATCCTAAGTCGATTGACTAAACGTGGCGAGGGACCATCTCCCAATGTAACAGTAACTGGAAGCCTGGTTCAGTCTGCGCCAATTCCTGGAGTGAGTACAGTCACTATTCAACCGAAAATGCAACCCTTGCTTTTGGGTTCCAACACAATTATGCCATCATTAAATGCCAAAGCCAGACCCCTCAATTTCACCTCTCCGCCCGTGATGTACTACCCAGCCCCAGTAACAGGCAATACTGCTACCATCACAGTGCGACCTCCTCCACCGACAACGCTGCTTCTACCCTCTTCCACCTCGGTAGCAAGCCTGCCAAAACCAGGACCCATAATGACGGTAACCAATCCCAGCTCTTCAATGATCAGTCATCATGCGAACTTACCAACACCTGCTCAGTACGTTACTGCAGTGATAACCAAGCCAACTGTTACGGGGGCTTTACCTGTACCTCAGGTGATGCCGCCCACTCCTGCAACCACTGCTCCAGTGCTCACTCCTGTAATCAACAGTGTGTTCAGTCTGAGCGCCGGTAAAAGTGGAACTGAGTCTCCTCGCAGCTCTACTCCGCCTGTCATCCAAGGGAGTCTTGGGAAAATGCTTAGCAAGTCAGCTTCAGCGTTGGTGGAAAATCAGATCTCCTCTATTATACGCAGTAAGGCTTCGGCTATGGGTCTGATCAAACCTGATACTTCCTCTAACCCCGGCTCTCCAAAAGTAACTGAAGCACGTGTTTCTTCGCCTTCCCTGGGTCCAGCAGCACCCCAGGCCCCGCCAGCTGAATCAGGTCAAACTCAAACACCAGTCACTGGAGACAAGGCAGAAGGTGCTGACCCAGATGTAATTTGCTTGGATTGAGCTTGATACTGTGTAAAAGATCCAGTCAACAAGTGGTAATTCTCGATGAAACGAAAGTGTCATCCCCAGATAAGTGGCTAAACGGAAAAGAGTTTGTGTTCGTAGATAAGCTCAGTCTTGAAGTTATAACTTGTAAAAATAAAATAAAAATATATAAACGCAGCGATCTGTTCAAGTTTCCTTTTGAGTACAATTTTTTTGCACCTAAAACAAAAAGAACTCCGACAAGAAAGTCACAAAACAGATTATTTAACAACAACAATGCTGTTGTTAATGTTTATTTGTTTGCTTTTTCCTTGTTGGTATGAAAAGTGAATGGGAATGAAGAGTTTCAACTTTTAAACCTGTCGCGTCTACAAAACTTTACTGAACTTCTCGTTCCCTGCCTGTAAAGTCAACGAAGGCAGGGAAGCAAGAGCTGGTTAATAAGAAAAATGTTTTAAGTTAAGAAGTACGTTTTTGTATTCCCTTCTTGTAGTAAATGCAATCAGAAAAGGGTTAGTACAACACTAAAGAACAAAAATAAGCAATGAAAAAAGATGAATGCGTCTCGGTGACTCAATGTAGCCATTGCTAAATGGAAACATTTCACGTAAGGTAACTGCGGCGGAAGATGTAGAAGTGCATGTTACAAAATATTAGAATAAAATTAAGAGGAAAGT

Protein

asel_s0049.g2.t2

MSSSSSRKKEFQSSVDGSNDADSEKPQSKKRRTEESVVSSTVENGKKRKRDDENEHETAMKDNEQSSSKKQNITRDEDPVARNGNEESTKEEEISKAESVAKDLHLKNIEVKISEENEQGMTYLKFSKLVRYLIVEANPSSAHTKINALLGALWYDYKKKKSLGVASSNSASVKGGNKGKKQKTTPKAVKSTKPKEAVEIVSDGEESDPDSAIDDDDDDAVIGESQAETKSRTKIKLVFKSKKGAKGDRKLKLLDDDSDRASETSSGSRSRKSNGKSKGKNKSSKKKIDLADEDSDTSQASGKNKKKAGKSKGKREKIVINKKGKKDRKKKAGNDDYNVVSVDEHQDYCEECEEGGGLLLCDTCTLSFHLRCLDPPLDEPPQGRWSCPVCEDEMTSDSSEDMHSDYCRVCKDGGQLLCCDSCPSAYHLHCLIPPMKKIPGGDWRCPRCKSEPLKGKVERILHWRYVTLPVEDLLVERDELSEPETYETREFFVKWLDMSYWHCSWITELQLEIHHPSMYRAYFRKNDMEEPPPVDDGDEDKETPAHVIQSTEAEDESNLEARFYRYGVRPEWLQIYRILRHRVTKQSKEEYLIKWRDVPYNLSTWEDPEDHNNFQISDFKDHIAKYKELRETYDKKFVNKKKSNKQKKLKKTVPACDPRDKYEEQPEFISACGGKLHEYQMEGLNWLRFSWAQGTNTILADEMGLGKTIQTIVFLYSLWKEGHSQGPFLISAPLSTIINWEREFEFWAPDMYVVTYAGDKLARATIRNHDFSFDEEAVKTGLKPHKFKKDHPVKFQALLTSYELVSIDMTTLQSIDWAVLVVDEAHRLKNKQSKFFQILSAYSIDYKLLLTGTPLQNNLEELWNLLNFLDPVEFKNQNTFLTEFEDVAKEDQIKKLHDILGPHMLRRLKADVLKGIPSKSELIVRVELSPQQKKYYKYILTRNFEALNTKGSHQVSLLNVMMELKKCCNHPYLFSSAALEAPRGPSGNFEAAALTRASGKLVLLEKMLKKLREQGHRVLIFSQMTRMLDLLEDFLEGHGYKYERIDGTVNGSARQECIDRFNATGAQTFCFLLSTRAGGLGINLATADTVFIYDSDWNPHNDIQAFSRAHRIGQNNKVMIYRFVTRASVEERITQVAKKKMMLTHLVVRPGLGSNKSAVMSKSELNDILRFGTQELFKDDNAKDGDSGDSGRIDYDERAILSLLDRTSSHDDAPDDEKDIMANEYLASFKVASYVVKEKDDDVEVLKQDAEAADPDYWEKLLRHHYEQFQEDEARHLGKGKRIRKQVSYVDGGMEDQEESAWTNNLSDFEDDGYSDVEEEESDEEFNQKSEGRQRRGGRGASDKEVTPPLLAKVQGNLEVYGFNMRQRKAFLNAIMRYGLPSPQGSRRSQWFARDLRGKSEKAFQAYVAMFLRHLCEPGTDNRETFNDGVPREGLQRTQVLTRIGIMSLIRRKVEEFAHINGWEAYPDEDTTSEKPSSKTSSRVSTPIAEVDGKKVEQELTKIESKAETTTEKKEETDDRSERMDSENVEAVKPESSKENKDTVKQENDKQASSSAENGDGNNQGKDQHETYLHDGGDKISEETNMEVELSSEKEDVAKEKEEEGDRKNETESMDVDQSAEKTVDEQKTEQKEETGDEEKSTVEKKDNNAAKTEENENDVTMGTDSGKEDKQTTKDEVSGKSEELVEECNKSANDEELENTEKKHGETTEDREKQTEQTEKGDSSKNVSDKTDSDMKDQSPSAGDDTSGQKPEEKAAPGKPEGSVKAEQETTESEPAGSIKHEKTNEEKNTVAKKSIGSDALAQRRFVFNIADGGFTELHTLWEVEEKRKCDDIWWRSHDYWLLAGVVTHGYGRWQDIANDRKFGVVNEPFKNVSLEYKNRFIARRFKLLEQALVIEEQLRRADSMKLRQDANHPAMALNARFAELECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVNRLPSALVRMPPVTARLNMSERGILSRLTKRGEGPSPNVTVTGSLVQSAPIPGVSTVTIQPKMQPLLLGSNTIMPSLNAKARPLNFTSPPVMYYPAPVTGNTATITVRPPPPTTLLLPSSTSVASLPKPGPIMTVTNPSSSMISHHANLPTPAQYVTAVITKPTVTGALPVPQVMPPTPATTAPVLTPVINSVFSLSAGKSGTESPRSSTPPVIQGSLGKMLSKSASALVENQISSIIRSKASAMGLIKPDTSSNPGSPKVTEARVSSPSLGPAAPQAPPAESGQTQTPVTGDKAEGADPDVICLD

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q12873	Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens OX=9606 GN=CHD3 PE=1 SV=3
Q14839	Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens OX=9606 GN=CHD4 PE=1 SV=2
Q8TDI0	Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens OX=9606 GN=CHD5 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001712 (this species only)
Ubiquitin family	E3\|E3 activity RING\|PHD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00176 all species →	SNF2-rel_dom	SNF2-related domain	Domain	Interproscan
PF00271 all species →	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF00628 all species →	PHD	PHD-finger	Domain	Interproscan
PF06461 all species →	CHDII_SANT-like	CHD subfamily II, SANT-like domain	Domain	Interproscan
PF00385 all species →	Chromo	Chromo (CHRromatin Organisation MOdifier) domain	Domain	Interproscan
PF06465 all species →	DUF1087	CHD subfamily II, DUF1087	Domain	Interproscan
PF08074 all species →	CHDCT2	CHDCT2 (NUC038) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000330 all species →	Domain	SNF2, N-terminal	Interproscan
IPR011011 all species →	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR001650 all species →	Domain	Helicase, C-terminal domain-like	Interproscan
IPR002464 all species →	Conserved_site	DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site	Interproscan
IPR016197 all species →	Homologous_superfamily	Chromo-like domain superfamily	Interproscan
IPR019787 all species →	Domain	Zinc finger, PHD-finger	Interproscan
IPR009462 all species →	Domain	CHD subfamily II, SANT-like domain	Interproscan
IPR038718 all species →	Homologous_superfamily	SNF2-like, N-terminal domain superfamily	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR023780 all species →	Domain	Chromo domain	Interproscan
IPR000953 all species →	Domain	Chromo/chromo shadow domain	Interproscan
IPR009463 all species →	Domain	Domain of unknown function DUF1087	Interproscan
IPR049730 all species →	Domain	SNF2/RAD5-like, C-terminal helicase domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR014001 all species →	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR012957 all species →	Domain	CHD, C-terminal 2	Interproscan
IPR001965 all species →	Domain	Zinc finger, PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45623 all species →	CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0140658 all species →	Molecular Function	ATP-dependent chromatin remodeler activity	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0006338 all species →	Biological Process	chromatin remodeling	Interproscan
GO:0000785 all species →	Cellular Component	chromatin	Interproscan
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0042393 all species →	Molecular Function	histone binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11643	CHD4, MI2B; chromodomain-helicase-DNA-binding protein 4	EC:5.6.2.-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of asel_s0049.g2.t2 across 24 RNA-seq samples of Acropora selago. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

24Samples

0TPM > 0

1Conditions

0.0Max TPM

0.0Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
coral larvae	24	0	0.00	0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study
SRR14308004	coral larvae	coral larvae	not recorded	not recorded	SRP315987
SRR14308005	coral larvae	coral larvae	not recorded	not recorded	SRP315987
SRR14308006	coral larvae	coral larvae	not recorded	not recorded	SRP315987
SRR14308007	coral larvae	coral larvae	not recorded	not recorded	SRP315987
SRR14308008	coral larvae	coral larvae	not recorded	not recorded	SRP315987
SRR14308009	coral larvae	coral larvae	not recorded	not recorded	SRP315987
SRR14308010	coral larvae	coral larvae	not recorded	not recorded	SRP315987
SRR14308011	coral larvae	coral larvae	not recorded	not recorded	SRP315987
SRR14308012	coral larvae	coral larvae	not recorded	not recorded	SRP315987
SRR14308013	coral larvae	coral larvae	not recorded	not recorded	SRP315987
SRR14308014	coral larvae	coral larvae	not recorded	not recorded	SRP315987
SRR14308015	coral larvae	coral larvae	not recorded	not recorded	SRP315987
SRR14308016	coral larvae	coral larvae	not recorded	not recorded	SRP315987
SRR14308017	coral larvae	coral larvae	not recorded	not recorded	SRP315987
SRR14308018	coral larvae	coral larvae	not recorded	not recorded	SRP315987
SRR14308019	coral larvae	coral larvae	not recorded	not recorded	SRP315987
SRR14308020	coral larvae	coral larvae	not recorded	not recorded	SRP315987
SRR14308021	coral larvae	coral larvae	not recorded	not recorded	SRP315987
SRR14308022	coral larvae	coral larvae	not recorded	not recorded	SRP315987
SRR14308023	coral larvae	coral larvae	not recorded	not recorded	SRP315987
SRR14308024	coral larvae	coral larvae	not recorded	not recorded	SRP315987
SRR14308025	coral larvae	coral larvae	not recorded	not recorded	SRP315987
SRR14308026	coral larvae	coral larvae	not recorded	not recorded	SRP315987
SRR14308027	coral larvae	coral larvae	not recorded	not recorded	SRP315987

Source: CnidoSite RNA-seq expression matrices (ASELA_TPM, StringTie quantification over 24 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.