Genomic Location: sc0000052_pilon:1068150...1083399
NR annotation: XP_015780920.1, PREDICTED: uncharacterized protein LOC107358863 isoform X1 [Acropora digitifera]
| CDS | ||||
| asel_s0052.g68.t1 | ||||
| Transcript |
| asel_s0052.g68.t1 |
| Protein |
| asel_s0052.g68.t1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03564 | DUF1759 | Protein of unknown function (DUF1759) | Family | Interproscan |
| PF17921 | Integrase_H2C2 | Integrase zinc binding domain | Domain | Interproscan |
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF00665 | rve | Integrase core domain | Domain | Interproscan |
| PF05380 | Peptidase_A17 | Pao retrotransposon peptidase | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR011044 | Homologous_superfamily | Quinoprotein amine dehydrogenase, beta chain-like | Interproscan |
| IPR007111 | Domain | NACHT nucleoside triphosphatase | Interproscan |
| IPR005312 | Family | Protein of unknown function DUF1759 | Interproscan |
| IPR043128 | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| IPR041588 | Domain | Integrase zinc-binding domain | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR001584 | Domain | Integrase, catalytic core | Interproscan |
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR021109 | Homologous_superfamily | Aspartic peptidase domain superfamily | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR008042 | Family | Retrotransposon, Pao | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22955 | RETROTRANSPOSON | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0015074 | Biological Process | DNA integration | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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