Detailed information of asel_s0053.g15.t1 in Acropora selago

Genomic Location: sc0000053_pilon:156177...178265
NR annotation: XP_029192806.1, uncharacterized protein LOC114959073 [Acropora millepora]
Species Acropora selago · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4U2R1E3 ubiquitin-protein ligase HERC2 OS=Mus musculus OX=10090 GN=Herc2 PE=1 SV=3
O95714E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens OX=9606 GN=HERC2 PE=1 SV=2
Q5ZIJ9E3 ubiquitin-protein ligase MIB2 OS=Gallus gallus OX=9031 GN=MIB2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009187 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00092
all species →
VWAvon Willebrand factor type A domainDomainInterproscan
PF06701
all species →
MIB_HERC2Mib_herc2DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010606
all species →
DomainMib-herc2Interproscan
IPR002035
all species →
Domainvon Willebrand factor, type AInterproscan
IPR037252
all species →
Homologous_superfamilyMib/herc2 domain superfamilyInterproscan
IPR036465
all species →
Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24202
all species →
E3 UBIQUITIN-PROTEIN LIGASE MIB2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →
Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567
all species →
Biological Processprotein ubiquitinationInterproscan
GO:0046872
all species →
Molecular Functionmetal ion bindingInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for asel_s0053.g15.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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