Gene detail

Detailed information of asel_s0056.g10.t1 in Acropora selago

Genomic Location: sc0000056_pilon:160226...164004
NR annotation: XP_029211177.1, membrane progestin receptor gamma-A-like [Acropora millepora]
Species Acropora selago · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

asel_s0056.g10.t1

CACGTTCGTCACGCAGTTGTCCACGCAGTTGCAAAGATTATGTGATGAGCCAGACTCCGCTGTAGCATTGCAGACTCGTGATTTTCAAAGGTCAAGCCGACGGTCAAGCCGACAAAATGTCTAACAATTGTGAGGGAGTGAAAGAGTTGAAAAGTGACCTTCGTGGTGTAAAATTCAATCTTCCTGAATGCAAAGTTCCCTTTGAATTTCGGGAACCTTACATTTTATCCGGTTATCGACAACCTTGCTTGTCCGCACGCGAATGTTTACATAGTATCTTCAAACGCTGCAACGAAACCGTCAATGTTTGGTCACATGTAGTTGCTTGTGTATTCGTTGCTGTTCGATCGTGGATGATCTTTCGTGAACACAATCCATTGGAAGATGCTTTTGTTTATCCTTTTCTGTCGTTTGCGGTTGGTTCATCGGTGATGTATGCTATGAGTGTTGGAGCCCACTTGTTCAACTCTATGTCAAGCAATACTCGGCATGTTTGCTTCTTCTTCGATTATGCAGCGATCAGTGTTTACGCGTTCTCAGCGGGACAAGCCTTTTACTTTTATTCAAGACCTTTGAACTCAGACTGGACAATCCTTCGTTCTCATTCCACATTCACTCTGGTGTGTGTTGCGATGTCATGTTTCACGATCTATTCGTGTTGCATGTCGAGGCATCGCTGGATTGCTTTCAAGTACATATTTCGTACCGGAACCTTCACTACTTCCTTCTTTATAAACACGCTGCCATATTGGGTCCGAATCTGGGATTGTCACTCAGAGGTTGATTGTTATCACATATCATTTCCATACTTCCGTCGTCAATATATATTCTTCGCCATAGCAGGTATAGCGAATGGGAGCAGACTACCAGAAAGGCTAATTCCTGGCGTGTTCGACTTTTGTGGGCAAAGTCACCATTTTCTTCATATTCTGTCAGCCCTTGGCAATATTGATCAGATGACAGCACTCTATCTGGACATGTTAGGAAGAAGAAATGCTCTTGAATCATCAATCACACTTCCCACTTTTGCCAACAGCCTGCTTTTGACGTTGGCAGTCATTGTGGCTAATGTTACTGTCGTCTTCTGGTTTGCATTTTCCATGAAACCTTTAGAGAGTTCATGTGGACCTAAACCTGAAGGAAAACAAAACTGAATTGAATGCATTGTGCCAGGTTGCCTTTGTGAGTGAATTTCATTGTTACATGACCCGTTTCACAGTTTGAAGCATACTATAGGGAAGGGTTTACCTCAAAAGTGAATATTATGAAATACGTAAATTAAATGATGAAACACAGTACATTTGCTTCAAAATACATCCAATATTAATGCATTTCAGCAATTAGCATCATATAATTATTTAGGGAATAGTGTGAGCTAGGTTAAAGTCTAGaggggccggttgtttgaagcctggttagcgctaaccattgattaagaggtattaaaacctataggtttccatggtatttaaccctggttagcgctaaccatgctttgagcaacccgggccagATACTGCTAAATCCATCTACATCCATGTGTCACAGCACTCTGCTAATGCACCTATCATTGGCTATTGCCAGGGGGTAGCCCTGCGCAAGGGAGGGGATTTTGTACTGGATCCTGTTGAAGTTCTTGACTCCTTTTCTTTGAAGGGAACACAGAGGAATGAAAGTTAAGAAATTCCCCCCTCCAAAATGGGGATCATATTGAACAGCATCAAACCACATTTAACTTGAGAGTACAAACATAACCAGATGACCCAGCTCAAGTGACTAGAAAACAGTACTTTACTCTTTAAGAAAATTGCAACTCTTCATACAAAATTACAGTTTCAAGAGTTTATTGATTCACTAGTGATGACAACACTTGACTtgattcctcagaaaaaaaagttctagatgaatttttttgaaactttccctgaatgttctccaccaagcattgtttcgaaaaaaaacaaaaaaaatgataggtcaccattctcgcttaagagatatgatgggccaatcttaccccatttatgcttgttctcgtgctaatcacgcgcattattcatcgcttcacgttaaattttgcagtagctcgaaacatactttgttgaagtaacacttgggaaaaaacatgataggaggataatgtgtacaatatttttatgtaataaaaaatataggtcaccatgcttgtttaagaggaaaggaccatcgcaccttttgaggtttcttcttgattgagaatattccgccatgttcgagaaagaaaggatgtttttgcactttcaacgatttcaaaactttcgctcagctgtcttttccttctttgccacaaatttctacctcttttttccaaccatgcctttcgaaacgcacatttttctcacgtgcaagctttccggctaggaaaaccgcaattatgttttgttgcgtgttattatgcgcagtacaggatgcacagtgcaatactgaggaatcaccttaaAATATAAAGGATGGCCAGTTCATCATACAAACTACTACTGCTAGGCTTCCTTTGGCCTTACACAGAAATGTTTCTCACAATACTGAAAACCATCCAAAACAATTAAATATTACATTCACCTTGTACAGACAATCAATCAACGTAAAATATTCTCTTGATTTTTGAACTCAAGAATGAGGTTTGTAAGGCTAATTTCAGTGCAAACAAAAAATATTAAAAATTAAGGTCAGCCGTTTTTGCATAGGGTCTATAGCATTTAGTGCTAAATCTATCTAAAATACTTGTCAAATAGAGCACATATCACAGTAGTACTCAGGCATCACAAAATCCCCTGTTTTCCTGCGGTGTAAGGCTTCCAGAAACCAAACCTCCATCATTTTGCTTTACCTGCAGGGTAAAACGATCATTCAAACCCCCCTATAAGTCCCCATAGAAAGTTGTATTTGCCTGGGGTCCCCCCCCCCCAGGGGATGGCCGATGATATGTGCGTAAGTGAGATGTGGCTGTTCCTGATTATGGATCATCATGTACACCCAAGCCTAGTTTAGACACACTGGTCAGATATTTGTTGGGCAGCAATATTGCCCCAGATCTCAACATTGAATTCCTTAGGGTTTATGATCATGGGGTCAGAGGGGGTTCCATATAACAAGACATGAATACACAAGGTTTTATTTTTGATACACATGGGTTCAACAGAAAAGGTCTTTGTCTAAGTTTAATTGTTTCTGCTTATTCTTGTGGCATGCACTATAACTTGAAACCAACCTATCAAGGCTAAGCCTTTGTTTAGTTACCTACAATGTATCTTAGACATCTGAGGCAAATGTGTAAGTTTTCTATTCTTAAAGCCTGTTGACATTTACAGCACCTCAATTAAACCATCACCTCTGACAAATCAATAGAGTTTTGGGCTAAAAGTTTGGTAATGTTTTTGCATTATTTGTGATCTTCTTTAGCATTAACAATTTTGCTTGCACATACAAAATTGCACCAGACAAGAAACAGGCATATAATTAGTAATTGTCACAGTTTGAAAACTATTTTAACATGCTTTTGAAATTATGGGTAAAGGAATAAATGAATAATCAATAC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7ZVH1	Membrane progestin receptor gamma-A OS=Danio rerio OX=7955 GN=paqr5a PE=2 SV=2
Q6TCG5	Membrane progestin receptor delta OS=Mus musculus OX=10090 GN=Paqr6 PE=2 SV=1
Q6TCH4	Membrane progestin receptor delta OS=Homo sapiens OX=9606 GN=PAQR6 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000884 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03006 all species →	HlyIII	Haemolysin-III related	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004254 all species →	Family	AdipoR/Haemolysin-III-related	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20855 all species →	ADIPOR/PROGESTIN RECEPTOR-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0038023 all species →	Molecular Function	signaling receptor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K25041	PAQR5, MPRG; membrane progestin receptor gamma	-	Chemical carcinogenesis - receptor activation	ko05207	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.