Detailed information of asel_s0060.g10.t1 in Acropora selago

Genomic Location: sc0000060_pilon:66216...78401
NR annotation: XP_015761657.1, PREDICTED: transcriptional adapter 2-alpha-like [Acropora digitifera]
Species Acropora selago · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3SZP8Transcriptional adapter 2-alpha OS=Bos taurus OX=9913 GN=TADA2A PE=2 SV=1
O75478Transcriptional adapter 2-alpha OS=Homo sapiens OX=9606 GN=TADA2A PE=1 SV=3
Q6AYE3Transcriptional adapter 2-alpha OS=Rattus norvegicus OX=10116 GN=Tada2a PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006289 (this species only)
Transcription factor familyMYB · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00249
all species →		Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001005
all species →		DomainSANT/Myb domainInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017884
all species →		DomainSANT domainInterproscan
IPR017930
all species →		DomainMyb domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12374
all species →		TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003682
all species →		Molecular Functionchromatin bindingInterproscan
GO:0003713
all species →		Molecular Functiontranscription coactivator activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006338
all species →		Biological Processchromatin remodelingInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0070461
all species →		Cellular ComponentSAGA-type complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for asel_s0060.g10.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP