Detailed information of asel_s0069.g37.t1 in Acropora selago

Genomic Location: sc0000069_pilon:372763...375105
NR annotation: XP_044179461.1, WD repeat and SOCS box-containing protein 2-like [Acropora millepora]
Species Acropora selago · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001705 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07676
all species →
PD40WD40-like Beta Propeller RepeatRepeatInterproscan
PF07525
all species →
SOCS_boxSOCS boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001496
all species →
DomainSOCS box domainInterproscan
IPR051983
all species →
FamilyWD repeat and SOCS box domain-containing proteinInterproscan
IPR011659
all species →
RepeatWD40-like beta propellerInterproscan
IPR036036
all species →
Homologous_superfamilySOCS box-like domain superfamilyInterproscan
IPR001680
all species →
RepeatWD40 repeatInterproscan
IPR015943
all species →
Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15622
all species →
WD40 REPEAT PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000209
all species →
Biological Processprotein polyubiquitinationInterproscan
GO:0035556
all species →
Biological Processintracellular signal transductionInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for asel_s0069.g37.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP