Detailed information of asel_s0089.g60.t1 in Acropora selago

Genomic Location: sc0000089_pilon:1134203...1152224
NR annotation: XP_044179609.1, uncharacterized protein LOC122961088 [Acropora millepora]
Species Acropora selago · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000004 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05380
all species →		Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF17921
all species →		Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF18701
all species →		DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF13873
all species →		Myb_DNA-bind_5Myb/SANT-like DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008042
all species →		FamilyRetrotransposon, PaoInterproscan
IPR041588
all species →		DomainIntegrase zinc-binding domainInterproscan
IPR012337
all species →		Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584
all species →		DomainIntegrase, catalytic coreInterproscan
IPR036397
all species →		Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR040676
all species →		DomainDomain of unknown function DUF5641Interproscan
IPR028002
all species →		DomainMyb/SANT-like DNA-binding domain 5Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22955
all species →		RETROTRANSPOSONInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0015074
all species →		Biological ProcessDNA integrationInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for asel_s0089.g60.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP