Gene detail

Detailed information of asel_s0127.g11.t2 in Acropora selago

Genomic Location: sc0000127_pilon:126776...155592
NR annotation: XP_029212080.2, methionyl-tRNA formyltransferase, mitochondrial-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

asel_s0127.g11.t2

GAATTTTTCCCGGTCAAATGAATTGGTAATAAAACGACGGACTGAGCGAAAGCTTAAAAAATCAGTGAAACCATGGTACATTTTACAAGGTCTTTGCTAGCAGGAAAAGGGACCTCTTCACCTCCGTGGAGGATATTATTCTTTGGAACAGATAGATTTGCGATATCTCCATTGAAGGCTCTGGTTGAAAACAGTCGAGCCTCAGGTTCAATTGTAAGACAGGTTGATGTAGTTTGCCCCCCAGAACGAAGAAGAAAGAAAATTATCAAGGATAGTCAGTTCCTGGACACTGTGAGAGATTTTTCCTTAAATCACAATATTCCAATCTACTACTGGCTTGGGAAGGAAGGATGGGATGCTGATAACAAACCAGCAAGTCAATATGATATTGGGATTGTGGCATCATTTGGTCACCTGATACCTAATCATGTCCTGGATATGTTTCCATGTGGTGCAATAAATATTCATCCATCTCTGCTGCCTCAGTGGAAGGGAGCTTCACCTATTTCTCAAGCAATATTGACTGGAGCAAAAGAAACAGGAGTTTCCATAGTTGAAGTCTCAAGAGAAAGATTTGATGCTGGACAGAGTCTTTTGCAACAGAAATGCATGATTCCGGAGGACACAATGTTTGATGATCTCTCTGAACAGCTTGCAAGACTTGGGACTAAAATGCTGATGTACACTCTTGAAAACCTGGAAGCGTTACGGAGGAACCCAGCTGTGCTGCATCCTAAATTAAGAGCCAGTTGGGCATCGTTTTTTCATAGCTCGTCGTCTAGCAAAAGACACAGGCCACATTGACTGGACTCGCGACAGTTGGTTGATCATTAGACGAAAATGGAATGCACTCTCAACCAGGGTTGGAGTTTTAACCAGCTGGAAAGGACAAAGGGTGAAATTAACAAAAATGTCGAAAGAGTTCTTCATTCTTACTCCTGAAGAAAAGTTATCTACCATTCCAGGGGAGGTGAAATTTGACAGAGATCGCGATGTTATTCTTATCAGATGTGAGGATAGCTGGGTAGGAGTCAAGCAGCTGCAGTTTGAAACCAAGACTGCTATCACTGCAAGAGACTTTTTCAACTCTTATCTACAAACCTGCCATGTGAAAGGTTCATCGAAGACGTGCTTTGAAGATTTGCCAAACAAGGAGAGATGACGAAGGCCATCCTGCAGGAATCACTACCCGAACTGGCTATCATTTTCATCCAGCCACTAAAAGCAATAAGCTTCCATGCATTGCTTTCAAGGAAAAGCGGAGAGGGAAGAAACTGCAAACAACCGTGCGCCACAGCAAGTCGCAAACTAGTAATTTTGAAAAAAACCGGCGTGTCTTTGAAGATAAAATTTATGTTCAAGGAAACGTTTCTGAAAGAAGCCAACAAGAGCACAGCATAGTTACTACAGCTGACCTTCAATAGCGAGGGTTTAGGGCGTCACTATGGCCCGCCTTCTTTCGATTGCGATTATGACCTGGGTAAAGACGTGCAAGGCTCCGGTAAAATGTAATCATGGGATAAACCAGTTTACAAGGTGTTAATATTGAAATTTCTGGAGGATGCCTATAGACCAAGTCAGGATTCGAGCCAGGACTCGAATATATTTCGCTTTCCCGCCATTTTCAACAAAAACTATTGTCAATGGTAAACAACCGTCTCGTTTTCCGGTCCATGAAGGAAAATTTCCCCTGTTTCCCTGTAGTTCGCCCAAAGGAAGATCTACTATCTCATTTCAATGTTTGCAAACAAACACCTCACTAATTGCCGGTTTTCTAACTTGTTCGTTATTTACTGGGCAAATTAAGAAAAGGATCTTCGAAACGTTCCACGTAAAGATCGCTCATTCTCTATTAAAAAATTGAAGTCTCGGTCGACTCCGTATCGTGGAAATGTCATTAAACTGACCCATGTAATCACTAATAATAAGTAATAATTATTATTTCGATTTGTTCCTAAATTTGCTGTTTGTTTATTATTTTTTTGGCTGACAAAAAATTAGTGAGGTCATA

Protein

Uniprot

Uniprot term	Description
Q3YSQ0	Methionyl-tRNA formyltransferase OS=Ehrlichia canis (strain Jake) OX=269484 GN=fmt PE=3 SV=1
Q8K974	Methionyl-tRNA formyltransferase OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) OX=198804 GN=fmt PE=3 SV=1
Q2GFU1	Methionyl-tRNA formyltransferase OS=Ehrlichia chaffeensis (strain ATCC CRL-10679 / Arkansas) OX=205920 GN=fmt PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00551	Formyl_trans_N	Formyl transferase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002376	Domain	Formyl transferase, N-terminal	Interproscan
IPR041711	Domain	Methionyl-tRNA formyltransferase, N-terminal domain	Interproscan
IPR036477	Homologous_superfamily	Formyl transferase, N-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11138	METHIONYL-TRNA FORMYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0004479	Molecular Function	methionyl-tRNA formyltransferase activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0071951	Biological Process	conversion of methionyl-tRNA to N-formyl-methionyl-tRNA	Interproscan