Genomic Location: sc0000139_pilon:683739...699367
NR annotation: XP_029191248.1, LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein L-like [Acropora millepora]
| CDS | |||||
| asel_s0139.g60.t1 | |||||
| Transcript |
| asel_s0139.g60.t1 |
| Protein |
| asel_s0139.g60.t1 |
| Uniprot term | Description |
|---|---|
| P14866 | Heterogeneous nuclear ribonucleoprotein L OS=Homo sapiens OX=9606 GN=HNRNPL PE=1 SV=2 |
| Q8R081 | Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=2 |
| F1LQ48 | Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01607 | CBM_14 | Chitin binding Peritrophin-A domain | Domain | Interproscan |
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| PF13893 | RRM_5 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | Domain | Interproscan |
| PF00090 | TSP_1 | Thrombospondin type 1 domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR002557 | Domain | Chitin binding domain | Interproscan |
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR000884 | Repeat | Thrombospondin type-1 (TSP1) repeat | Interproscan |
| IPR036383 | Homologous_superfamily | Thrombospondin type-1 (TSP1) repeat superfamily | Interproscan |
| IPR036508 | Homologous_superfamily | Chitin binding domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15592 | MATRIN 3/NUCLEAR PROTEIN 220-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005576 | Cellular Component | extracellular region | Interproscan |
| GO:0008061 | Molecular Function | chitin binding | Interproscan |
| GO:0003729 | Molecular Function | mRNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0043484 | Biological Process | regulation of RNA splicing | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K13159 | HNRNPL; heterogeneous nuclear ribonucleoprotein L | - | Spliceosome | ko03041 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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