Detailed information of asel_s0147.g44.t1 in Acropora selago

Genomic Location: sc0000147_pilon:793080...801808
NR annotation: XP_029202916.2, nucleoporin NUP35-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6P6X9Nucleoporin NUP35 OS=Danio rerio OX=7955 GN=nup35 PE=1 SV=1
Q8NFH5Nucleoporin NUP35 OS=Homo sapiens OX=9606 GN=NUP35 PE=1 SV=1
Q68FY1Nucleoporin NUP35 OS=Rattus norvegicus OX=10116 GN=Nup35 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05172Nup35_RRMNup53/35/40-type RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007846DomainRNA-recognition motif (RRM) Nup35-type domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR017389FamilyNucleoporin, NUP53Interproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21527NUCLEOPORIN NUP35Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006913Biological Processnucleocytoplasmic transportInterproscan
GO:0017056Molecular Functionstructural constituent of nuclear poreInterproscan
GO:0031965Cellular Componentnuclear membraneInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005543Molecular Functionphospholipid bindingInterproscan
GO:0006607Biological ProcessNLS-bearing protein import into nucleusInterproscan
GO:0006999Biological Processnuclear pore organizationInterproscan
GO:0044613Cellular Componentnuclear pore central transport channelInterproscan
GO:0044615Cellular Componentnuclear pore nuclear basketInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14313NUP35, NUP53; nuclear pore complex protein Nup53-Messenger RNA biogenesisko03019deepkoala

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