Detailed information of asel_s0148.g3.t1 in Acropora selago

Genomic Location: sc0000148_pilon:52271...76385
NR annotation: XP_044174481.1, uncharacterized protein LOC114956219 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P49746Thrombospondin-3 OS=Homo sapiens OX=9606 GN=THBS3 PE=1 SV=1
Q05895Thrombospondin-3 OS=Mus musculus OX=10090 GN=Thbs3 PE=1 SV=2
Q1L8P7Thrombospondin-3b OS=Danio rerio OX=7955 GN=thbs3b PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05735TSP_CThrombospondin C-terminal regionFamilyInterproscan
PF02412TSP_3Thrombospondin type 3 repeatDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008859DomainThrombospondin, C-terminalInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR028974Homologous_superfamilyTSP type-3 repeatInterproscan
IPR017897RepeatThrombospondin, type 3 repeatInterproscan
IPR003367RepeatThrombospondin, type 3-like repeatInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000742DomainEGF-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10199THROMBOSPONDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04659THBS2S; thrombospondin 2/3/4/5-Glycosaminoglycan binding proteinsko00536deepkoala

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