Detailed information of asel_s0168.g7.t1 in Acropora selago

Genomic Location: sc0000168_pilon:75317...108705
NR annotation: XP_029190354.1, SPARC-related modular calcium-binding protein 1-like isoform X1 [Acropora millepora]
Species abbreviation ASELA · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q62288Testican-1 OS=Mus musculus OX=10090 GN=Spock1 PE=2 SV=2
Q08629Testican-1 OS=Homo sapiens OX=9606 GN=SPOCK1 PE=1 SV=1
Q9H3U7SPARC-related modular calcium-binding protein 2 OS=Homo sapiens OX=9606 GN=SMOC2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005406 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00086
all species →		Thyroglobulin_1Thyroglobulin type-1 repeatDomainInterproscan
PF07648
all species →		Kazal_2Kazal-type serine protease inhibitor domainDomainInterproscan
PF10591
all species →		SPARC_Ca_bdgSecreted protein acidic and rich in cysteine Ca binding regionDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000716
all species →		DomainThyroglobulin type-1Interproscan
IPR018247
all species →		Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR002350
all species →		DomainKazal domainInterproscan
IPR036857
all species →		Homologous_superfamilyThyroglobulin type-1 superfamilyInterproscan
IPR051950
all species →		FamilyDevelopmental regulator and protease inhibitorInterproscan
IPR011992
all species →		Homologous_superfamilyEF-hand domain pairInterproscan
IPR019577
all species →		DomainSPARC/Testican, calcium-binding domainInterproscan
IPR036058
all species →		Homologous_superfamilyKazal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12352
all species →		SECRETED MODULAR CALCIUM-BINDING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005615
all species →		Cellular Componentextracellular spaceInterproscan
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K24354SMOC; SPARC-related modular calcium-binding protein-Glycosaminoglycan binding proteinsko00536deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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