Genomic Location: sc0000169_pilon:78927...105985
NR annotation: ROL46693.1, Pogo transposable element with KRAB domain [Anabarilius grahami]
| CDS |
| asel_s0169.g4.t1 |
| Transcript |
| asel_s0169.g4.t1 |
| Protein |
| asel_s0169.g4.t1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF09607 | BrkDBD | Brinker DNA-binding domain | Domain | Interproscan |
| PF03221 | HTH_Tnp_Tc5 | Tc5 transposase DNA-binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006600 | Domain | HTH CenpB-type DNA-binding domain | Interproscan |
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR010921 | Homologous_superfamily | Trp repressor/replication initiator | Interproscan |
| IPR018586 | Domain | Brinker DNA-binding domain | Interproscan |
| IPR009057 | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR33332 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0043565 | Molecular Function | sequence-specific DNA binding | Interproscan |
