Detailed information of asel_s0187.g2.t1 in Acropora selago

Genomic Location: sc0000187_pilon:13646...53443
NR annotation: XP_044181966.1, LOW QUALITY PROTEIN: protein scribble homolog [Acropora millepora]
Species Acropora selago · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4H4B6Protein scribble homolog OS=Danio rerio OX=7955 GN=scrib PE=1 SV=1
Q80U72Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib PE=1 SV=3
Q14160Protein scribble homolog OS=Homo sapiens OX=9606 GN=SCRIB PE=1 SV=6
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002000 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00595
all species →		PDZPDZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036034
all species →		Homologous_superfamilyPDZ superfamilyInterproscan
IPR001478
all species →		DomainPDZ domainInterproscan
IPR050614
all species →		FamilySynaptic Scaffolding LAP/MAGUK FamiliesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23119
all species →		DISCS LARGEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005912
all species →		Cellular Componentadherens junctionInterproscan
GO:0009790
all species →		Biological Processembryo developmentInterproscan
GO:0016323
all species →		Cellular Componentbasolateral plasma membraneInterproscan
GO:0030054
all species →		Cellular Componentcell junctionInterproscan
GO:0043113
all species →		Biological Processreceptor clusteringInterproscan
GO:0045197
all species →		Biological Processestablishment or maintenance of epithelial cell apical/basal polarityInterproscan
GO:0097120
all species →		Biological Processreceptor localization to synapseInterproscan
GO:0098609
all species →		Biological Processcell-cell adhesionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for asel_s0187.g2.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP