Genomic Location: sc0000189_pilon:127996...147751
NR annotation: XP_029190564.2, uncharacterized protein LOC114957329 isoform X1 [Acropora millepora]
| CDS | ||||
| asel_s0189.g13.t1 | ||||
| Transcript |
| asel_s0189.g13.t1 |
| Protein |
| asel_s0189.g13.t1 |
| Uniprot term | Description |
|---|---|
| Q3ZBT6 | Transformer-2 protein homolog beta OS=Bos taurus OX=9913 GN=TRA2B PE=2 SV=1 |
| P62995 | Transformer-2 protein homolog beta OS=Homo sapiens OX=9606 GN=TRA2B PE=1 SV=1 |
| P62996 | Transformer-2 protein homolog beta OS=Mus musculus OX=10090 GN=Tra2b PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF15384 | PAXX | PAXX, PAralog of XRCC4 and XLF, also called C9orf142 | Family | Interproscan |
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013087 | Domain | Zinc finger C2H2-type | Interproscan |
| IPR027873 | Family | Protein PAXX | Interproscan |
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR050441 | Family | RNA-binding motif | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR48034 | TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0006303 | Biological Process | double-strand break repair via nonhomologous end joining | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0005681 | Cellular Component | spliceosomal complex | Interproscan |
| GO:0048026 | Biological Process | positive regulation of mRNA splicing, via spliceosome | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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