Gene detail

Detailed information of asel_s0227.g31.t1 in Acropora selago

Genomic Location: sc0000227_pilon:412276...428328
NR annotation: XP_015767742.1, PREDICTED: tyrosine-protein phosphatase non-receptor type 11-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

asel_s0227.g31.t1

TGATAACGGGGAAGAAGCTCATATATTTGTGGCGGTGGAATTTATTTATTAATCACCTTTAAAATGCCCTCACGAAGGTGGTTTCATTCGTACATTTCTGGTTACGATGCAGAAAGGTTGTTGTTAGAGAGGGGTTTCGATGGGAGTTACCTCGTCCGGCCGAGCAAGAGCAATCCAGGAGACTTTACATTATCCGTGAGGAGAGATGGAGAGGTTACACACATTAAAATCCAAAACACTGGAGATTTTTATGACTTGTATGGTGGAGAGAAGTTTGCCACTTTGTCAGAACTTATCCAGTTTTATACAGAGAATCCTGGACAGCTAAAAGAAAAGAATGGTCAGATCATTGAGATGAAATACCCTCTGAATTCCACAGATCCTACTACTGAAAGGTGGTTCCATGGTCACATGTCTGGCAAAGAAGCAGAGACCATGATGCTGGACAAAGGAAAAAATGGAAGCTTTCTTGTTCGTGAAAGCCAAAGTAAACCAGGGGACTTTGTTCTTACTGTAAGATTGGAGGACAAGATAACTCATGTGATGATCCGCCACCATGATGATGCAAAATATGATGTGGGTGGAGGAGAAAAGTTTGATGACTTGACAGATCTGGTGGAGCATTACAAGAAAAATCCCATGGTGGAAAAATCAGGCACTGTTGTACAGCTTAAGACACCGTTTAATGCTACAAGAATCAATGCTGCAGCCATTGAAGACAGGGTCAAGGTGCTGCAAAAAGAAAACAACAGTGTCTCAGGAAAAGCAGGCTTTTATGAAGAGTTTGAGGTTCTTCAGAAACAAGAGTGTAAACATCTGTACAGCAGGAAGGAAGGAGACAGAGCTGAAAACAAGGCCAAGAACAGATACAAGAACATCCTTCCTTTTGACCATAGTCGAGTGGCTTTAAAAGACTGTGACCCGAATGTGGTTGGATCCGATTACATCAATGCAAATTTTGTTGGGGGTAGTGATAGTGATGACGCTCCCAAACGGTACATTGCTGCCCAAGGCTGCCTTCCAAGCACTGTTGAAGATTTCTGGAGAATGGTTTTTCAGGAGAACAGCAGAATCATTGTCATGACAACAAAAGAAGTAGAAAGGGGAAGGAACAAGTGCACACGCTATTGGCCTGATCCAGATACAACAAAGGACATATCTACTTTCCATGTCAGATACCTTAAAGAATTTGAATACAGTGATTATACACTAAGAGAGTTTGAACTCACATCGGAAACCAATCCAATCCCTCGCACTATTTATCAGTTCCATTATACTGGCTGGCCTGATCATGGTGTTCCTAAGGATCCAAGCCCTGTCTTAAATATTCTCCATGAAGTTAATGCAAGGCAACAGTCAATCCCTTCGGCTGGACCAATCATAGTGCATTGCAGTGCTGGAATTGGCAGGACTGGTACATTTATTGTGATCGATACCCTGATCAACATGATCAAAGAGCAAGGTCTCGACTGTGAAATTGATATTTCTAAAAGCATTCAGATTGTGAGAGCTCAGAGATCTGGCATGGTGCAAACAGAGGCACAGTATGAGTTCATTTACAAAGCCATTCAGCATTACATCAGCACAGAAACTGCAAGACTGAATAGTGACAATCCCAACCTAGCAGTGTATGGCAATTTGGCCAATGTGAGGAAAAATGGAGAAACAGAGATCCCTCCCCCAATCCCTATGTATCAGCCTGCAGACAAATGTTCAAGACCTGCAAAGAGAGAAGAATCATTCAAGTCTCCAAACATGCCACCCCGCCTTGGTGAGGGACCACCGCCTCCTCTTGCGCCAAGAAAATCTGGTAAAATTTGAGAGGAATTGGCCAGTGCGTCAAATGAAACATGGAATAAACAGTGAATATGGTGGAATGCACATAATTATGTCTACAGCTGTAGGCTAACTCCTCATTAGGTCTTTCCTTCCAACAATTAGACCGAAGTAAACAACTGTGTGTTTCTTAATCAATATCTTATCTGCATTCTTCTTGGGATTTTCAATGCCCAATTTCAGTTATTACACTGTAGAAGGGAAAGTGCTTTGTAAAAATACCGCCAACCTACACTTGTAGCTTTGTTTTTCTTAATATTGTTACTTTCCTTCTTCTTGTTTATATTCTACCTCCACTTCAGTGGAAAAGTAAGAGTTGATATAACATGACATTTCAATGTCATAAGTTATAGGACCACAGTTGTTCCCTAAATGGATGACTCTATCCAGTGATTATCTGTAAGATATTTGGTCAAGGTAGAACTTGATCTAATCAATTTGATGTGCCATTTGCCCTTGCCAGTCTTGTGCACAACCCATATTTAGCATTGATTAGATCACGTCACCATTGGTTTTGTTAAGTAAAATACACTTTTTACATTGTATGTAGATATTTTAAATGAATGTGACTTTAATAATCTTCATAGATTGTTTTCTAAAGATCTGTCTCCAACTAAACCCtaaaggctttcactccgaaggggtttgcccttgaggagtaaaattgtatgccattagagagtaaaatctagtgtcagtggcactgtcaagagtgaaagggtgaatgaaagtactaggatagctgatgttTCCTGAGATGTTGTTCCTGGGCTTTAAAATATAATTCCAGTATTTCTTGCATAGGTCATTGGTCAGACTGTTTTTGCTTCACATTTGTTAAATTCAGAATGATCCTTGGTCCTGTATTGGTCCTTGGTCAAAGAAATGGCTTGCAGATCAGTTGTAAGAAAAATAGTTGAAGATTTCCCAGAGATAATACCTAGTCAATGAAATAATAATTATTATTGTGATATTGACAAACATATTTCTGATTTTTTCCAAAGAAAAAGAATAACAACAATTATTGTAATTTGGTCAATGTAAAAATATTGCAATACTTAGTTTTTAGTGAACCATTGATTACTGGGGAATTTTAGAATAAGAATTGATAGGGTGCAAAGAAGAAGCTTTGTTGAAAAGCAACAGTATTATTTTTTTTGTCATGAAATGAAATGCAGACATTACATTATGATGGACTTGTAGATCAAGAGAATCCAGAATCATCAAAAGAGAAATAAAGTTTTGATATAACTATGTTTCTTAGCGTTTTTTAGGAATTTTCAGCTGGTAAGAAATTTAGAGTCTAATTGAGTAGGATAGGGTGCCTTTTGCACCAAAGTTATTTCTTTTTGTATTGGGTACTGTCTGAATATTATTGGTTATGTTTTTGTACTTACTCTAATAGTACTTACACTAAAAGGAGTCTAATAATAGAACATGTGCTTGATAACAAACCGAGTCTAACAAATACAAATATGATTGCCTAAGTAACAAGAGTCAAACAATCGATATGTGTATATAAATATAATAGCCAGTAATAAAACGGTACCTAATAA

Protein

Uniprot

Uniprot term	Description
Q90687	Tyrosine-protein phosphatase non-receptor type 11 OS=Gallus gallus OX=9031 GN=PTPN11 PE=2 SV=1
Q06124	Tyrosine-protein phosphatase non-receptor type 11 OS=Homo sapiens OX=9606 GN=PTPN11 PE=1 SV=3
P35235	Tyrosine-protein phosphatase non-receptor type 11 OS=Mus musculus OX=10090 GN=Ptpn11 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00102	Y_phosphatase	Protein-tyrosine phosphatase	Domain	Interproscan
PF00017	SH2	SH2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036860	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR012152	Family	Protein-tyrosine phosphatase, non-receptor type-6, -11	Interproscan
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR000242	Domain	Tyrosine-specific protein phosphatase, PTPase domain	Interproscan
IPR000980	Domain	SH2 domain	Interproscan
IPR000387	Domain	Tyrosine-specific protein phosphatases domain	Interproscan
IPR003595	Domain	Protein-tyrosine phosphatase, catalytic	Interproscan
IPR016130	Active_site	Protein-tyrosine phosphatase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46559	TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 11	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004725	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0004726	Molecular Function	non-membrane spanning protein tyrosine phosphatase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0030971	Molecular Function	receptor tyrosine kinase binding	Interproscan
GO:0050839	Molecular Function	cell adhesion molecule binding	Interproscan
GO:0070374	Biological Process	positive regulation of ERK1 and ERK2 cascade	Interproscan
GO:0016311	Biological Process	dephosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07293	PTPN11, SHP2; tyrosine-protein phosphatase non-receptor type 11	EC:3.1.3.48	Protein phosphatases and associated proteins	ko01009	deepkoala