Gene detail

Detailed information of asel_s0232.g29.t1 in Acropora selago

Genomic Location: sc0000232_pilon:408576...422789
NR annotation: XP_044164261.1, acyl-CoA dehydrogenase family member 11-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

asel_s0232.g29.t1

GTTCGCTCTGGGAACGAAAAGGCAGAAAATGGCTGAGGTATCGTCAGTTCGCACGGAACACAAGTTTGACGAAAATTCTCTCCACGAATACCTAAAGAAAAACTTGCCAGGGTTTCCTAAAGGTCAAGGATGCTTGTCAGTGTCACAGTACAGTGAAGGTCAGTCAAATCCTACATTTTACCTGTGTAAGAATGGCAAGGAATTTGTTTTACGCAAGAAACCACCAGGGAAGCTGCTTAGAGGAGCTCATCAGGTCCAAAGAGAATTCAGAGCGCTATGGGCTCTCCATAGTGTTTCATTTCCAGTTCCCAAGCCATACATTTACTGTGAAGATCAGTCTGTTATAGGGACAGAATTTTACATCATGGAACATGTCACAGGGGATATATTCCGTACACCAAGTTTACCCAATAAAACCAGTGATGAACGAAAAGCAATTTATAATGCGATGATTACAACCTTGGCGAGGTTGCATAACGTGGATTGGAGAAATCTTGGATTATCTGATTTTGGTCGTCAAACAGATTATTTGAGAAGACAGGTGTCAACCTGGGGAAAGCAATACAAAGCTGCAGAGACACAGAAGATAGATCCAATGGAAAAGCTATTGGTCTGGCTTCAGAATAACGTACCACCATTAAATATGCAAGAGACAGTTCTAGTTCATGGTGACTTCCGATTGGATAACGTAGTTATTCACCCTACTAAGTTGTGCGTAGTTGCTGTGTTGGACTGGGAATTATCAACCCTAGGAGATCCAATTCTTGATCTTGCTTACTTTTGTTTGCCTTACCATGTTCCAAAAGAACTGAAAGATGTATTACCTTTCATAGCCCAAGGTGAGTCAAACCCTGGGATTCCATCTGAAAGAGAGGCAGTGTCCACATATTGCAGGCAACGTGGACTTGATATGGCATCAGTGTTGAAGCATTGGAACTTCTATCTAGCTTTGTCGTTTTTTCGAATAGCTTCCATTGCCCAGGGTGTCTATGCACGCTCCTTGCAAGGAAATGCAAGTGCCAAGAATGCCTCTACATTTAAACACGTTGTTGAACCACTGGCTGAAATAGGATTGAAATTGGCTCTTCAAGATGGTGACCCTCCATTAACTAACAGTAGTCTATCAAGTGCATTGAGTGGTAGCTCTATATTTGAACTGTCTGCCAAAGCAGAGACCTTGTACAAGAAAATGAAGGCTTTCATGGAAAAACATATCTACCCTGCTGAAGAGGAATACTACCAGCATATGACAAATCCTTCCGTACAGTGGACTGTTCCACCATTCTTGGAAGATTTAAAGAAAAAAGCCCAATCAGCTGGTTTGTGGAACCTTTTTCTTCCTGGTGAGTCAGGTTTGAGTCAACTGGATTATGCTCCATTAGCTGAGTTGACGGGGAGATGTTCCTTTGCTCCAGAAGTATTTAACTGCAGTGCTCCAGACACTGGAAACATGGAGGTTCTTCATCTTTATGGGACAGAAGAGCAAAAGAAGCAATGGCTTGAACCTCTTCTAAGCGGTGAAATTAGATCTGCATTTTGTATGACAGAGCCTGATGTGGCCTCGTCGGATGCAACAAACATGGAGTGCGAGATTAAAAGAGAGGGCAATGAACTTGTTATCAATGGAACAAAATGGTGGAGTAGTGGTGCCGGAGACCCGCGTTGTAAGGTAGCCATTGTAATGGGATGCAACAAGGCAGACAACTTTCCAAAGCACAAACGTCACTCTATGGTGATAGTTCCGATGGATACCCCAGGCGTAACGAAAATCCGGTCACTTACCGTCTTTGGCTACAATGATGCTCCGCACGGTCACTTTGAGATCGCGTTTAAAAATGTCCGGGTTCCCGTGGCGAATCTTATTCTTGGCGAAGGGCGCGGGTTTGAAATAGCTCAAGGTCGTTTAGGGCCTGGGCGACTTCACCACTGCATGCGAGCGATCGGAGCCGCAGAGCGAGCCCTTGAATTGTTGGTGCAGCGGTCCTTGTTTAGAGTGGCTTTTGGCAAACGTCTAGCAGAAAAGGGAATGGTGCAAGAACAGATTGCTCTGTCGAGAATTGAAATCGAGCAGGCCAGGTTGCTAGTGTTCAAGGCTGCGCACACCCTCGATCACCATGGAAACAAAGCCGCAAGAAAGGAGATTGCCATGGCAAAGATTGCCGTTCCCCGCATGGCTTGCAGGGTAATTGACCGAGCAATTCAAGTACATGGTGGGATGGGTGTTTGCCAGGATACACCGCTGGCCTTTGCGTATGCTGGAGCACGGAGTCTGCGCATTGCTGATGGACCAGATGAGGTGCACTTGGAAGCTGTCGCAAAACAGGAGCTGAAAGGAGCATTGAAAGCCCGGATGTGACCTTCAACCAGGTCTCTTCCGTACATGCGCAGTCATAaataaataataatattaatt

Protein

Uniprot

Uniprot term	Description
B3DMA2	Acyl-CoA dehydrogenase family member 11 OS=Rattus norvegicus OX=10116 GN=Acad11 PE=1 SV=1
Q5ZHT1	Acyl-CoA dehydrogenase family member 11 OS=Gallus gallus OX=9031 GN=ACAD11 PE=2 SV=1
Q80XL6	Acyl-CoA dehydrogenase family member 11 OS=Mus musculus OX=10090 GN=Acad11 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00441	Acyl-CoA_dh_1	Acyl-CoA dehydrogenase, C-terminal domain	Domain	Interproscan
PF02771	Acyl-CoA_dh_N	Acyl-CoA dehydrogenase, N-terminal domain	Domain	Interproscan
PF02770	Acyl-CoA_dh_M	Acyl-CoA dehydrogenase, middle domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037069	Homologous_superfamily	Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily	Interproscan
IPR009075	Domain	Acyl-CoA dehydrogenase/oxidase, C-terminal	Interproscan
IPR013786	Domain	Acyl-CoA dehydrogenase/oxidase, N-terminal	Interproscan
IPR006091	Domain	Acyl-CoA oxidase/dehydrogenase, middle domain	Interproscan
IPR009100	Homologous_superfamily	Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily	Interproscan
IPR046373	Homologous_superfamily	Acyl-CoA oxidase/dehydrogenase, middle domain superfamily	Interproscan
IPR050741	Family	Acyl-CoA dehydrogenase	Interproscan
IPR036250	Homologous_superfamily	Acyl-CoA dehydrogenase-like, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48083	MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016627	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0003995	Molecular Function	acyl-CoA dehydrogenase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0033539	Biological Process	fatty acid beta-oxidation using acyl-CoA dehydrogenase	Interproscan