Detailed information of asel_s0238.g6.t2 in Acropora selago

Genomic Location: sc0000238_pilon:69216...92410
NR annotation: XP_029197678.2, leucine-rich repeats and immunoglobulin-like domains protein 1 [Acropora millepora]
Species Acropora selago · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6P1C6Leucine-rich repeats and immunoglobulin-like domains protein 3 OS=Mus musculus OX=10090 GN=Lrig3 PE=1 SV=1
Q8WZ42Titin OS=Homo sapiens OX=9606 GN=TTN PE=1 SV=4
A2ASS6Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006554 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927
all species →		Ig_3Immunoglobulin domainDomainInterproscan
PF13855
all species →		LRR_8Leucine rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003591
all species →		RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR000372
all species →		DomainLeucine-rich repeat N-terminal domainInterproscan
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan
IPR050333
all species →		FamilySmall Leucine-Rich ProteoglycansInterproscan
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR000483
all species →		DomainCysteine-rich flanking region, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45712
all species →		AGAP008170-PAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for asel_s0238.g6.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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