Detailed information of asel_s0253.g16.t1 in Acropora selago

Genomic Location: sc0000253_pilon:523457...525043
NR annotation: XP_015772070.1, PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107350356 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9FGH2Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5 OS=Arabidopsis thaliana OX=3702 GN=LSH5 PE=1 SV=1
Q9LMK2Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 OS=Arabidopsis thaliana OX=3702 GN=LSH6 PE=1 SV=1
A2Y3I2Protein G1-like9 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19565 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04852ALOG_domALOG domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011010Homologous_superfamilyDNA breaking-rejoining enzyme, catalytic coreInterproscan
IPR040222FamilyALOG familyInterproscan
IPR006936DomainALOG domainInterproscan
IPR013762Homologous_superfamilyIntegrase-like, catalytic domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31165PROTEIN G1-LIKE2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0009299Biological ProcessmRNA transcriptionInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

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