Detailed information of asel_s0288.g6.t1 in Acropora selago

Genomic Location: sc0000288_pilon:236475...254925
NR annotation: XP_029189668.2, tetratricopeptide repeat protein 30A-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A4IHR1Intraflagellar transport protein 70A OS=Xenopus tropicalis OX=8364 GN=ift70a PE=2 SV=1
Q6INU8Intraflagellar transport protein 70A OS=Xenopus laevis OX=8355 GN=ift70a PE=2 SV=1
A7YE96Intraflagellar transport protein 70A OS=Danio rerio OX=7955 GN=ift70a PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13865FoP_duplicationC-terminal duplication domain of Friend of PRMT1FamilyInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR025715DomainChromatin target of PRMT1 protein, C-terminalInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR039941FamilyTetratricopeptide repeat protein 30Interproscan
IPR019734RepeatTetratricopeptide repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20931UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005879Cellular Componentaxonemal microtubuleInterproscan
GO:0030992Cellular Componentintraciliary transport particle BInterproscan
GO:0042073Biological Processintraciliary transportInterproscan
GO:0120170Molecular Functionintraciliary transport particle B bindingInterproscan

TOP