Gene detail

Detailed information of asel_s0318.g20.t1 in Acropora selago

Genomic Location: sc0000318_pilon:220346...230360
NR annotation: XP_029204794.2, START domain-containing protein 10-like [Acropora millepora]
Species Acropora selago · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

asel_s0318.g20.t1

CGGTGACGTTTTGAAGCAATTTTTACTAAAACTCAACCTAGTTAGGAAAAGACGACTTCCTGCGATCAGCTTGCTTGGAATTTCTATCCTTTCTCAGTCATTTCTAACGCTCGCATTAAGTGTTTGAGACGCAACTGGAAACACGGTTTAAGCGCTGATTAACAAGTTTATCTTAAGTAAGGCGAAGGAAAATCTGTGTACACGGCTGTTCGATGCAAGTTGGCGAAGTCCGGCCTGCGAAGGCAGACGATTTTGAGCATTTTCGTCGACTGGCGGAGAGTATCGATGGGTGGAATCTACAGTACGATAAACAGGGAACTAAAGTGTTCAGCAAAGTCAAAGATGGTTCTACGATTAGACTTATAAAGGTTGTGGCAAAATTTAATGATGTTTCATGCTCGTTAATGTATGATGTCCTTCATGACGGGGATTACAGGAGATGCTGGGATGAGAACATGGTGGAATGCTACGAGATATGTCAACTTGACAGATACAATGATATAGGCTACTATTCAATTAAATGTCCCACTCCAATGAGAAACAGGGATTTTGTAACCCAAAGGTCATGGAACTGGGCAGATGATGATTTTATTATCTTTAATCACTCTGTATATCACAAGCATGTTCCAGTGAAGAAGGGTTTTATCCGTGGTCAGTCAATTTTAAGTGGGTATTTTGTTCAAAAGAGTGGAGATGGATGTTCAGTGACGTATGTATCACAAGTAGATTTAAAAGGTCATTTACCAAAATGGTTAGTTAACAGAGCTTCAACAAAAATTGCTCCTAAGGTTGTTATCAAGGTGCACAAGGCAGCCCTTGGCTATCAAGTATGGAAAGCAGAACATGCTCCCAGCTACAAGCCATGGATCTGGCCAGAACAAAGCATTCTTCCAGTGCTTCGTCCTGAAGATGCAGAGTATGTGAACAGTGACTCACCAAGCGGATCTGACCAGGAGCAGGAAGTCATTGGAGAAGACCCAGCTAATTACTCCAGTGAGGAAAATGTAGATGACAATATTATGCTTTGACAAAGGAATCCAACTTATAGTGACACAATCAAAGAATATTCCACTGTGTGTTTCATAGTTGCAGTGTTGTTTTGTCTTAGTTTGTTTATTTTGACATTCACAGCAAAGTTTGTAAATGTTTAAATGGTAGCTAGGAAAAAAACTATGAAAAAAATTTAGTGTAATCTCTTTGATAGAAAATATTGTAGCTTCATAAAAAAATTATAATGTTTGACTTACAATTCTTCAGAAAATTGCATTACTTTCCTTCTTTGGACTGAAATATGCACATAAGTAACTTATGATGTTTTGCAGCTGTTTATAAGTTATTAGTTAAAGCATTTTGTTTGGAATGTTTAATTAAATTCCCCAAGGAAAGCATGTGCATGTATCAGTGTACATTTGTTCGCTGTTGTGGTTAATCAAAACTGATGTTACAGCTGTCATAATTGTCAGTTGTAATCATACTTATACAATAATTTATTATATTTGCATTATCCCTCTTGCATTTGTAATGAGTAAAGTAGCTTCCCTTTGCTGCCTATAATACAACTTACTGTAGCTTGTATGACTGAAGCTTACTGTTTATACTATAAGATGAAAAAGGTGGGTTAACATTCAGTTGGTGAACTGGGCTCTTAATAATAATTATTATGCAGATGCAAATGACATTGATCACAAAATAAAAAAATGTAACTTATGTTACCTTCCCTGTCAGGTTGTTTGGTAATAATTATTATTGTCCTTAAGGATGACCCCCATATTACTGATGTACATAAGTAATAAAAAGAAAGTGAACTTGTTTTTAATTGTAAGATGTCCAGGAAGAAAAAAACAAACTACTTTTTTCAATAATTACCATAGGAACCTGTTGTAAATATGGTGGCACTGTATTTTGTTTTATGATGTGACTGAATTTAGTTTTCATTTCTTTCTGACTGCCTTGTGCCTTTTCTATAAAGATGAGAGACATTTTGTTGACATTCAATCATGTGAGTCAATGTAAGTGGTGTGGTTAACTTTGTTCATCCTCTGCGTCATGTCAATATTGAGAGAAAAGGAGGGGAACAAACAAAAGTCGATAGATATTAGGTTTTGCATTAATCTCTGGATTTAAGATTGGAGTGTGTATAACAAAAGGGAACAAGAAAAGAGTAAGCTTTAATTTGAGCAAAGAGGTTTTGGACCCCTTTTATGTTTGTATGAAAAGCACTTGCACTATTACACGGTTGGACTTTGTTTGCTTTTTCAAAAGTTAGATAAGTGCTATTAGGATTAACCATAGTTACATTTGCTGTCATACTAGTTCTTTGTTAACATGCTGATGCTGCCATAATCATGTAAAGCAGAGGTTATTGTTGAATAATAACTATTGATTTTTGGCAATCAGTATACAAAGTGCTACCAAGTTAGGGTAGCAATGTACATGTACTATAACTTATTTTGAAAGTGTCCTTTAATCTGTAACAACTGTAGGACCCGTGTTGAAGTTGCACTTTTAATGTTGTAGTACACAACTACTGTGTAAATAGTCTCTCTTCTAAGCATGGTTCCAGGAAGTGCTTTGTGAAACTTGGTCCTATAAAATACCCTTTGAATAATGTGTTTGGATCATTATTTCTCCATATTCTGAAGAATTTTGACCACTTTTGTCTCCTTGGAAAAAAATATTTTTAGTTCCTGTGCTGTCTGTGTGTGACATCATTTTCTTTGTTTTAATGAATTTGAACATGAGCA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9JMD3	START domain-containing protein 10 OS=Mus musculus OX=10090 GN=Stard10 PE=1 SV=1
Q9Y365	START domain-containing protein 10 OS=Homo sapiens OX=9606 GN=STARD10 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008205 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01852 all species →	START	START domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002913 all species →	Domain	START domain	Interproscan
IPR051213 all species →	Family	START domain-containing lipid transfer	Interproscan
IPR041951 all species →	Domain	STARD10, START domain	Interproscan
IPR023393 all species →	Homologous_superfamily	START-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19308 all species →	PHOSPHATIDYLCHOLINE TRANSFER PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008289 all species →	Molecular Function	lipid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24142	STARD10; StAR-related lipid transfer protein 10	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.