Gene detail

Detailed information of asel_s0328.g11.t1 in Acropora selago

Genomic Location: sc0000328_pilon:231947...251425
NR annotation: XP_015761607.1, PREDICTED: zinc finger protein 862-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

asel_s0328.g11.t1

CCAAGAGAATGCCTTGTTTTCTTAAGTGCCAAATGGAGCAGACAAAAGTCCAGCTTAACCACACAAAGAAGCTATTAGCCAAAATGTTGAAGAAGGTATGCCAGACACGATGGCTTAGTTTTGATGCTTCTGTCACAGCAGCCCTGCAGAGTTATGAAGCTATCCATCTGTCCCTTCAGGAGATTGATGATGCCACAGCTATTGGCTTAATATCCAAACTGAAGCAGGTGAAATTTATTGGGGCTCTATACATTCTGAATGCCATCCTGCCAGTTCTCACGTCTTTAACAAGACAGTTTCAAGCTGGTAATTTTCACTTCTCCAGGATAAGACCTGCTGTTAATCGAGCCCTGTCTTTCCTGGAGGCTTTGGAGGAAACAATTGAGCCGTTAGAGAAACTGATGGCAGACATCAACTCATTTACAGAAATTTCCGATGAGCTGAAGTGGGGAAAGGGTACCGGAAGGCAGTTGGAAACCCTCCTGACCAGTTATATCAAGGCTCTGACATCCAACATTAAAGATTGCCTTGGATATTCTCCAAAAGTCATTGAGGCCTATGCCATCTCTGACCCCCTTTTGCTTCCTTCAAGTGACGATGACAGCTTAAAAGAATATGGTGATGCTGAAATGATAGAAGTGATGGAGGGAGTTCACCAGCGAGCACACTGCTCTATGCATAATAGTTGGCAGAGTTGCATCAATGCTGCCATCCACATGTTCGTCACAAAGGCAACACTAGCTGCTTCCTGTGCAATGGGGAATGAAAAAAAAAGCAAGAATGGAGCTGGCCATCAGCCATTAAATGCTGCTATCATCCAGTGCCTTAATGGTAAAGTTTGCTCCAAATTTTCTAAAGATGGACATGAAATTGATGTTTTTGACTTTGTCGAGGCCAAAGGTCCGGCCACAAAGACTAAAGCTATCACCATTGTCGATTCGCCACTACATGCACTTATGAGAGATCAGATAGGCAAACTGGACTACCTTGGAGCGATTATTCTCAATGGAACGAAAAGCACCAACCATTTAGCAACGTCCTTAGCAACAGAAGGCAAACTGCAAATAATATTTTCACACCCAGAACTTCTTCTCGAGAACAACACAAAAGCGATGCTGAAAACAACCAACTTTCAGAGAAATGTACGTTGCATTGTAGTAGATGAAGCTCATTTAGTGGATGACTGCTCTGAGCTGGGTGATAATCAGTATGAGCCACTCCATGCAGACAAAGTGGCCAAGAACAGGCTATTTACTCAATATCATGCGCAATACCCAAAACATGAACAAGAACGCATTATGGAAGAACTTACTAAAAGGAAATCTGGCAATAGTTATGATCCTGACAACATtgatgatgatgataatgctgatgGTAAACCTTTTACAAGTCTGCTTCATATACAGGCTGAAGATGAGAACAAGGATATCCTCCTGAGGACAGTTCTCAAAAGGATCAACAGTAAACTGACAGGCCCACCACTGAAGGAAACAATAGATCCTACAGATATTTTAAATGATGCTATGGGCATTTATAAAAACCATCCTTTTGATGAAACTCGCCCTTTAAGGATAACCTTCACTGGTCAACCAGCAATAGACACAGGTGGACCTAGGAGGGAATTTTTTGATCAAGTGTTTGCAAAGCTTGCAGATGTGGACAATGGCTCTGGGTTTAAATTGCCAACTGTTTGAAGGCTCACCCACTCGATTGGTTGCAGTGTACAATGCCAGAATAGCCTTTTTAGGACTTATGAAATGTGTAGGGCGGTTGATTGCACATGCTATAGCTCACTGTGAGATTGGTTTCCCAAGACTTTCACCAGTGTGCTACTGGTATCTGATAAATCAAGATATTTCCAAAGCAATATCATATGCCAACATCTCAGACATTCAAGATACCTTGGTGGCTGATTACATCAGGAAGGTATTTCCAGTACAGTAGTTTGGCTAGACTTTTATATGTGCTTGTAGTTATTACTTACCCAAAGCAAGTTTGTATTAGCATGCTCATAGGATGCCCACTTTTTATTTTCTGCATTAAAGCCCAGACAGTTACCGTAACAATTAATAAAATTATGAAAGTCTG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR035983	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000569	Domain	HECT domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46880	RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan