Detailed information of asel_s0415.g2.t1 in Acropora selago

Genomic Location: sc0000415_pilon:27390...129345
NR annotation: XP_029180122.2, uncharacterized protein LOC114947653 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7TN88Polycystin-1-like protein 2 OS=Mus musculus OX=10090 GN=Pkd1l2 PE=2 SV=1
B8UU59Polycystin-1-related protein (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
Q7Z443Polycystin-1-like protein 3 OS=Homo sapiens OX=9606 GN=PKD1L3 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02010REJREJ domainFamilyInterproscan
PF01825GPSGPCR proteolysis site, GPS, motif MotifInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR000203Conserved_siteGPS motifInterproscan
IPR051223FamilyPolycystinInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR014010DomainREJ domainInterproscan
IPR003915FamilyPolycystic kidney disease type 2 proteinInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR046338Homologous_superfamilyGAIN domain superfamilyInterproscan
IPR046791DomainPolycystin domainInterproscan
IPR016054DomainLy-6 antigen/uPA receptor-likeInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR007110DomainImmunoglobulin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10877POLYCYSTIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0050982Biological Processdetection of mechanical stimulusInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

TOP