Gene detail

Detailed information of asel_s0455.g9.t1 in Acropora selago

Genomic Location: sc0000455_pilon:79416...81199
NR annotation: XP_029213441.1, pre-mRNA-splicing factor cwc2-like [Acropora millepora]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q4WU07	Pre-mRNA-splicing factor cwc2 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=cwc2 PE=3 SV=1
Q5BB35	Pre-mRNA-splicing factor cwc2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=cwc2 PE=3 SV=1
Q51TF7	Pre-mRNA-splicing factor CWC2 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=CWC2 PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR039171	Family	Pre-mRNA-splicing factor Cwc2/Slt11	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14089	PRE-MRNA-SPLICING FACTOR RBM22	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0000974	Cellular Component	Prp19 complex	Interproscan
GO:0017070	Molecular Function	U6 snRNA binding	Interproscan
GO:0036002	Molecular Function	pre-mRNA binding	Interproscan
GO:0071006	Cellular Component	U2-type catalytic step 1 spliceosome	Interproscan
GO:0071007	Cellular Component	U2-type catalytic step 2 spliceosome	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan