Gene detail

Detailed information of asel_s0881.g2.t1 in Acropora selago

Genomic Location: sc0000881_pilon:21886...48570
NR annotation: XP_015776085.1, PREDICTED: uncharacterized protein LOC107354153, partial [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

asel_s0881.g2.t1

atggtcaacagatggaaatatggtgcctgtttacctcaactcacggagcatgaggctgtcgtgagtaatgtggttgagatctgtgcccccacggaggtcgggagcttaaaattcaacaatgaggtgaaactggttctttcacacagtgctgcagaccttgaaggctacgaactggttatgaaaagactcacagacacggagaagaatgaatgggaagaaatagctggatgtgagaatattcgacaagtttcagATATCGAGGATGATAACCCGTGGACAATGAACGCTCCATATTCTTTTCCTGTGGTACGAGCTGGCATTTCAAGGTGTTCAACGTATGCTGTGGTCTCTCGGCTGAAGTTGTCTCCAACATACACCATTACAGTCAGTGGCGGAACATTCGCCCACCCTGATTATCCTCAAGTCATAATCACAGTACCTAAGAAGGCTGTTGCAACTGAAACAAAACTTTCTTTGCAACTAAAGatgattaacagaagGTACACTTTTCTCAATGATGGGACCAGTGGTGGCGCCAGTGCTGTTGCTTCTGGGTTTCTTGGCTATCTGTTGAGCATCGTAAGGAATCAGCCATTGGTTGCAAACTTCTTTGCTTACTTTAAACCAGCACAACGCCTCAAATCTCGCGATATTTTGTTCCTTGTCTGCTGTCCCGCACACCTCAGAGAAGAAGTCAAACAAGAGCGTGAAAGAGAAGGAGTGAACCCTCCCCCTTGCCATTGCAGCTCCAGTATAAGGATGATTCCTGAACGCGATAAGGCATTTGTGCTTGTGTCAGGAGGAATTTGCCCTGCTGAAGAGCTCAAGAATTTCTATCTAAGGCTTTATCGTGATACGGCATACGACGCCCAACTTGAAGTTTGTCGGATTAGCGACGAAGAATATGGTAAAGTGAAGTTTCGCAACGAAAACAACAGGTTGTTGTCAGAACTGAACTTAATATTGCCAAGTATCGATCATTGGGAAACACCAGTTGACAGTGGCCTTGCTGTAGCCTCCCCTGGTGGAGTTAATGGtgaagacaagtcaccgaagctcaatttccagctgaaaaaagctattgatgtcccaaaatccatgaaaacctggagtgatgattatctgccgattgatattttgctcatgactgcgaatagctgtgatttcttaagctgtttctccttcttggatcaacctttcaaacgttacgagtttaagattggttatgtgtactttggacgcatgggagatgccagtgacaaagaaaagctaaaggttgcattgttgcagtgctctaaaggagctgaaacccccgcgggctctttgacagtgcttcagaaggcattaagaaaattggggcctaaggctgtatttttagtgggaacttgcattagtttaaccttggagaaggtaaaaataggagatgtagtgatatcttctaagctaattactccagatggatacagaactcctgttagtccacttcttggcagtcttgctctagatgcaccaaatgggtgggttgctccgttggagaatccagatgaattggaccttacagtgcatcccagtggtgatatcttgagccagtcactgacaaagacatgtcgatatgatgacatttgtgagcaatatcctgaggcaattgcaatcgagacagaaggcagaggtgtatacgcggcagcttatgatgcaaatgtggagtggttaatagtgaaaggtgttgccagttattttcatcaaggccagcctgcaactgacgaatggatgtcttttgcgagcaccatggctgcttctgtggtggccaagatgctaaatgatccatcagttttcctggaatggccgcactttaaacgaggttctcctgacaaggatcagaatattcaggaaggaatgaagagtgaaagaaagaaatgcagcgatcaggacaaagcaggttcttctcacaaggatcagatcttacttcataatggagggaatagtgaaagaagaaaatgcagcaatccggacaaagcaggtgcttgttag

Transcript

asel_s0881.g2.t1

ggactttgcgctatttgagtttgtttggcatattttactaaggctgtgatttttaagggagcttagaaaagttcgtttttgtctcattagcatctgATGTAAAAGAAGGAAAAGCAGACAAAAAGGCGATTGATGGGGAAGAGAATCAATACGGTGGAAATGAGGGTAAAGACGACGGAGGAGATgctgaagctggtaaaacggagatgcaggaacaggagcactatgaccagggcaggtatgaggatgatctaagtgcacagataagtgagacgacggaagaggatttatttcatggaatccacgaactaccgatgaaagaacaagaagaactagacaaagtggcaatattcgaaggaactgtgacaagcgagggcttccacttggccctaggggccattcacctaaccttccctccggatactgtggctgagcccaccgacataatggtcaacagatggaaatatggtgcctgtttacctcaactcacggagcatgaggctgtcgtgagtaatgtggttgagatctgtgcccccacggaggtcgggagcttaaaattcaacaatgaggtgaaactggttctttcacacagtgctgcagaccttgaaggctacgaactggttatgaaaagactcacagacacggagaagaatgaatgggaagaaatagctggatgtgagaatattcgacaagtttcagATATCGAGGATGATAACCCGTGGACAATGAACGCTCCATATTCTTTTCCTGTGGTACGAGCTGGCATTTCAAGGTGTTCAACGTATGCTGTGGTCTCTCGGCTGAAGTTGTCTCCAACATACACCATTACAGTCAGTGGCGGAACATTCGCCCACCCTGATTATCCTCAAGTCATAATCACAGTACCTAAGAAGGCTGTTGCAACTGAAACAAAACTTTCTTTGCAACTAAAGatgattaacagaagGTACACTTTTCTCAATGATGGGACCAGTGGTGGCGCCAGTGCTGTTGCTTCTGGGTTTCTTGGCTATCTGTTGAGCATCGTAAGGAATCAGCCATTGGTTGCAAACTTCTTTGCTTACTTTAAACCAGCACAACGCCTCAAATCTCGCGATATTTTGTTCCTTGTCTGCTGTCCCGCACACCTCAGAGAAGAAGTCAAACAAGAGCGTGAAAGAGAAGGAGTGAACCCTCCCCCTTGCCATTGCAGCTCCAGTATAAGGATGATTCCTGAACGCGATAAGGCATTTGTGCTTGTGTCAGGAGGAATTTGCCCTGCTGAAGAGCTCAAGAATTTCTATCTAAGGCTTTATCGTGATACGGCATACGACGCCCAACTTGAAGTTTGTCGGATTAGCGACGAAGAATATGGTAAAGTGAAGTTTCGCAACGAAAACAACAGGTTGTTGTCAGAACTGAACTTAATATTGCCAAGTATCGATCATTGGGAAACACCAGTTGACAGTGGCCTTGCTGTAGCCTCCCCTGGTGGAGTTAATGGtgaagacaagtcaccgaagctcaatttccagctgaaaaaagctattgatgtcccaaaatccatgaaaacctggagtgatgattatctgccgattgatattttgctcatgactgcgaatagctgtgatttcttaagctgtttctccttcttggatcaacctttcaaacgttacgagtttaagattggttatgtgtactttggacgcatgggagatgccagtgacaaagaaaagctaaaggttgcattgttgcagtgctctaaaggagctgaaacccccgcgggctctttgacagtgcttcagaaggcattaagaaaattggggcctaaggctgtatttttagtgggaacttgcattagtttaaccttggagaaggtaaaaataggagatgtagtgatatcttctaagctaattactccagatggatacagaactcctgttagtccacttcttggcagtcttgctctagatgcaccaaatgggtgggttgctccgttggagaatccagatgaattggaccttacagtgcatcccagtggtgatatcttgagccagtcactgacaaagacatgtcgatatgatgacatttgtgagcaatatcctgaggcaattgcaatcgagacagaaggcagaggtgtatacgcggcagcttatgatgcaaatgtggagtggttaatagtgaaaggtgttgccagttattttcatcaaggccagcctgcaactgacgaatggatgtcttttgcgagcaccatggctgcttctgtggtggccaagatgctaaatgatccatcagttttcctggaatggccgcactttaaacgaggttctcctgacaaggatcagaatattcaggaaggaatgaagagtgaaagaaagaaatgcagcgatcaggacaaagcaggttcttctcacaaggatcagatcttacttcataatggagggaatagtgaaagaagaaaatgcagcaatccggacaaagcaggtgcttgttagCggttgaatagggagtttttggttgccctattaggatttAagTAgcctatggcgacctatctgcgagcaagTtttaTctT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01048	PNP_UDP_1	Phosphorylase superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000845	Domain	Nucleoside phosphorylase domain	Interproscan
IPR035994	Homologous_superfamily	Nucleoside phosphorylase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46832	5'-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE NUCLEOSIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0009116	Biological Process	nucleoside metabolic process	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0008782	Molecular Function	adenosylhomocysteine nucleosidase activity	Interproscan
GO:0008930	Molecular Function	methylthioadenosine nucleosidase activity	Interproscan
GO:0019284	Biological Process	L-methionine salvage from S-adenosylmethionine	Interproscan