Detailed information of asel_s1069.g1.t4 in Acropora selago

Genomic Location: sc0001069_pilon:1...28476
NR annotation: XP_015756049.1, PREDICTED: SCO-spondin-like isoform X2 [Acropora digitifera]
Species Acropora selago · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B3EWZ8Ectin (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
G5ECS8A disintegrin and metalloproteinase with thrombospondin motifs adt-1 OS=Caenorhabditis elegans OX=6239 GN=adt-1 PE=2 SV=1
B3EWZ3Coadhesin (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000646 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090
all species →		TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR053280
all species →		FamilyAerolysin-like pore-forming proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR34007
all species →		AEROLYSIN-LIKE PROTEIN-RELATEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for asel_s1069.g1.t4. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for asel_s1069.g1.t4.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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