Detailed information of asel_s2405.g1.t1 in Acropora selago

Genomic Location: sc0002405_pilon:1...5264
NR annotation: XP_015747111.1, PREDICTED: probable 28S rRNA (cytosine-C(5))-methyltransferase isoform X2 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P4099125S rRNA (cytosine(2870)-C(5))-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=NOP2 PE=1 SV=1
Q922K728S rRNA (cytosine-C(5))-methyltransferase OS=Mus musculus OX=10090 GN=Nop2 PE=1 SV=1
O9426825S rRNA (cytosine-C(5))-methyltransferase nop2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=nop2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01189Methyltr_RsmB-F16S rRNA methyltransferase RsmB/FFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018314Conserved_siteBacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved siteInterproscan
IPR049560DomainSAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic coreInterproscan
IPR001678DomainSAM-dependent methyltransferase RsmB-F/NOP2-type domainInterproscan
IPR023267FamilyRNA (C5-cytosine) methyltransferaseInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22807NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0000470Biological Processmaturation of LSU-rRNAInterproscan
GO:0001510Biological ProcessRNA methylationInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0008173Molecular FunctionRNA methyltransferase activityInterproscan
GO:0009383Molecular FunctionrRNA (cytosine-C5-)-methyltransferase activityInterproscan
GO:0070475Biological ProcessrRNA base methylationInterproscan

TOP