Gene detail

Detailed information of asel_s2784.g1.t1 in Acropora selago

Genomic Location: sc0002784_pilon:1...4487
NR annotation: XP_044164192.1, pumilio homolog 3-like [Acropora millepora]
Species abbreviation ASELA · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BKS9	Pumilio homolog 3 OS=Mus musculus OX=10090 GN=Pum3 PE=1 SV=2
Q09622	Pumilio domain-containing protein 12 OS=Caenorhabditis elegans OX=6239 GN=puf-12 PE=4 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005804 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08144 all species →	CPL	CPL (NUC119) domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040059 all species →	Family	Pumilio homologue 3	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR012959 all species →	Domain	CPL domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13389 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003729 all species →	Molecular Function	mRNA binding	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan
GO:0006417 all species →	Biological Process	regulation of translation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for asel_s2784.g1.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.