Detailed information of asel_s2806.g1.t1 in Acropora selago

Genomic Location: sc0002806_pilon:1...4210
NR annotation: XP_015754062.1, PREDICTED: uncharacterized protein LOC107333724 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8JHW2Thrombospondin-3a OS=Danio rerio OX=7955 GN=thbs3a PE=2 SV=2
Q9R0G6Cartilage oligomeric matrix protein OS=Mus musculus OX=10090 GN=Comp PE=1 SV=2
P49747Cartilage oligomeric matrix protein OS=Homo sapiens OX=9606 GN=COMP PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF12947EGF_3EGF domainDomainInterproscan
PF02412TSP_3Thrombospondin type 3 repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR017897RepeatThrombospondin, type 3 repeatInterproscan
IPR028974Homologous_superfamilyTSP type-3 repeatInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR024731DomainEGF domainInterproscan
IPR003367RepeatThrombospondin, type 3-like repeatInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10199THROMBOSPONDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0007155Biological Processcell adhesionInterproscan

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