Gene detail

Detailed information of asel_s5542.g1.t1 in Acropora selago

Genomic Location: sc0005542_pilon:1...1455
NR annotation: XP_044175833.1, pre-mRNA-splicing factor CWC2-like isoform X2 [Acropora millepora]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q54PH5	Pre-mRNA-splicing factor cwc2 OS=Dictyostelium discoideum OX=44689 GN=cwc2 PE=3 SV=1
Q4PA86	Pre-mRNA-splicing factor CWC2 OS=Mycosarcoma maydis OX=5270 GN=CWC2 PE=3 SV=2
Q4WU07	Pre-mRNA-splicing factor cwc2 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=cwc2 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR039171	Family	Pre-mRNA-splicing factor Cwc2/Slt11	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR034181	Domain	Pre-mRNA-splicing factor Cwc2, RNA recognition motif	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14089	PRE-MRNA-SPLICING FACTOR RBM22	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0000974	Cellular Component	Prp19 complex	Interproscan
GO:0017070	Molecular Function	U6 snRNA binding	Interproscan
GO:0036002	Molecular Function	pre-mRNA binding	Interproscan
GO:0071006	Cellular Component	U2-type catalytic step 1 spliceosome	Interproscan
GO:0071007	Cellular Component	U2-type catalytic step 2 spliceosome	Interproscan