Gene detail

Detailed information of aten_s0003.g165.t1 in Acropora tenuis

Genomic Location: sc0000003_pilon:2195820...2216097
NR annotation: XP_044178047.1, delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aten_s0003.g165.t1

GTGAGGAAATCGCAAAGAGAAGGATTCTTCATTGAGTTTTTTTTCCTTCTGGATCTTTTCTCAGCGACAAATTTTGAGATGTTATTGGTGCGGACACCTTTCAGGAGTCCATTTCTGAGACTCCTTGGCACAAGAGCTCTTTCCTTGCCTCCTAATGAACCACAAACCAATCTTGATAAAAACAGTGAGAATTTGAAGAAGTTAAAAGCTGAAATACAAAGAGTTCAGAATGAAACTCTGGAAATTCCCTGCATTGTTGGTGGAAAAGAGATTTATACTGGAAATACAGAATATCATGTTGCGCCTTACAACCACTCCCTCAAGATTGTCAAGTGTCATTTGGCCACAGAGGAAGTTATTACTGAAGCTATCGAAAGTGCAATGGCGGCCAGAAAGGAGTGGGAGAGAATGCCACATGAAGACAGGGGTGCTATTTTTCAGAAAGTTGCAGATTTAATTGCTGGAAAATACAGAATTCCATCATTAGCAGCTACAATGGTGGGACAGGCCAAGACTGCTTATGAGGCAGACATTGATTGTGTACAGGAGTTGGCAGACTTTTACCGATTTGGAGTTCATTATGCCAAGGAACTGCATACAGGCCCCGAACTTCACCAGCCTCCTGGTGTTATTAACAGAGTCATCTACAGAGGATTGGAGGGTTTTGTTGCCGCCATTACGCCTTTCAACTTTACTGCCATCAATGGCAACTTGTCGGGAACTCCAGCCATCGTTGGCAACGTTATGCTGTGGAAACCTGCTACCCCTGCAATTCTGGCCGCGAGTTTGGTGCAGAAGATATTCCAAGAGGCTGGTGTCCCAGATGGTGTAGTCAACTTCCTTCCCGCAGCTGGAAAAACCTTTGGCGACAGCATAACTAAGTCACCTCATCTCGCTGGAATCAACTTTACAGGCAGTGTAGAGACTTTCAGATATATTTGGAAGAAAGTTGCAGAGAACCTTGATGTTTATCGAACTTTCCCAAGGCTTGGAGGAGAATGTGGAGGGAAAAATTTCCACTTCATTCACCCGTCAGCGGATGTTGACTCGGCAGTTAACTGTACCATCAGATCGGCGTTTGGTTTTGCGGGACAGAAGTGTTCGGCTTGCTCACGTTTGTATGTTCCGGAATCGTTGTGGGGTCAGGTCAAAGAAAGTCTTGTCGAGAAGCAAAAGGAGCTCAAGTTGGGATCGCCTGAAGACTACGATACCTTTATTTCGGCAGTTATTCATGAAAAGTCGTTCAAGAAAGTCAAGAGTTATATTGACTATGCCCAAAGCAATCCTGATCTCAGCATTTTGGCAGGAGGAAAATGCGACGATAGTGTTGGCTATTTCGTAGAACCGACGATTATCGAAACAAAGAACCCTGAAGACAAAATCATGAAGGAGGAAATTTTTGGACCCGTACTGGCAGTTTACGTTTATCCTGATCAAAAATACAAGGAAACGCTGGAGTTGATGGATAGAACTTCTCCATTTGGTTTAACTGGAGCAATTTTCGCCAAAGACAGATATTTTATTCGGGAAGCTTCTGACATTCTTAAAGATGCCACGGGAAACTTTTACATCAACGACAAATCCACGGGATCTATTGTAGGACAACAGCCCTTTGGTGGGGCGAGGCTTTCAGGTACCAACGACAAAGCTGGCAGCTCGCATTACATCATGAAGTGGGTTTCAATTCAAAGCATAAAGGAAACTGTCGTGCCTACTGAGGATTACAAATATCCACATCAAAGCTGAAAAAATTCTATCGCTACACCAAGAATATAATTCCCTCGGTAGTAAATAAACAAACACGAGGCAGTTCATTTTATGCGATTGACGGAGACAGATGATTGCGCGAGAAATTGCCACGAACAAGACAAATACAAAAGCAAAAGAGGAAAGTAATCTATTAGAATAAAAAGACGTTGATAGTTTCGCACTACATTACATCTAGGCAAATTTAAATGTCCCTGATTATTCTCCTTGGGCTAGCGAGCTCATTTTTTGCGCTCACGGGTTGACTTGAACTGGGTAGCAATTGAGGCACATGCAGGCAAGGTCATAAGGTACCCTGCCAGGTTGAGGGTATAATTCATGCTTTTTCTGGTCCAACCATAGCGTGCAAATTTTAATATATTCTTATCCAGACCTCTGTGAGACGCAGAAGTCAAATTCTCGGGGAACCATACATTTTGTGACGATAAAAATGCTGCAACAGATTCAATGGGCCGTTTGCAGTTCATCTCAGCCTCTTTTTCAAACCAAATTTAACGAACCCTGTCGGCTAAGGGCCTCGCCGGCCCCCATTTGGCGAAACTTTATTTCGTTGAATTAGGCCCCATTTAGATGGAGAAAAGTTGTCCCGGGCAAGAGGGTCACCCTCCTAGCCGAGTGAACTTTACCGAGCGTTTATATGAGAAAAAAGTTTACCCCTCTGCCCGAGCCAAGAGCTAACTTTCCAATAACAACAGCTCGCGCATGCTCTGATCATCTCTCCTTGACCGAGTTGACCCGGCTAGGCGAGCCAAAGTGTTTATAGAGAGAAAAGTTGGCCCGGCTAGGAGGGTGACCCTACCATCGCAAAAGGGTAACCCGGCTAGGCGGGTAACCCTTCTAGCCGAGCCAACTTTTAATTTCTCGTGTAAATGGTTCGTCAAGTTTTGTAAGGGAATGTATGAAAAGTTGGCTCGCCAAGGGTAGCTCGGGTAGGCAGGGGACCCTTCTACCCTTGACAACTTTTCTCCATATAAACGGGGCCTTAGAAATCCCCCAGTACCAGCTTTGAATGAAGGCTGGTGCGACTTTAGGAAAGGCACTAACGTAGGAAAATATCAAATCGCCCGTCGTTTGTCAGCACGGAGGCTTCAATCTAAATGGATGAGCACCTCATTCGAAACTCACAGTCGGTGTGTGGAAATTTTTTAAATGTAAATCTCAGCTCCCGGTTCTTCAGCGATTTACTGTATTTTTCTTTTCACTTTGTGAAGTAAAAGGGTAAAATATTTCTCTTGTGTATTTGTTGCCATTACATTCTAAACCAATCCCCTGAAAGCGCGTTGTAAGAGCTTCGTTGCCAGGGTTAGTTTGGCCGTGACCGTCCTAGGCTTCCCATTAATCCTCACGTACTCTAATGAAGCCACCAGAACAAGTTTTGTCGCTGTTTTATTGGCAAAAGGCAATACAAAGACTGGAGGAAGATGAACAAATGAAAGGCCTTGGATGACTGACAAAGCAGAAGTGTACATGATAATTAAACATTGCGAATTCTAAAAAGCATGGTTTGATGTGTATGGACGGTTGTCTCAAGGCTCTTGATGGAGCAGAATCAACAATAAAACTTGAAACCAAAA

Protein

Uniprot

Uniprot term	Description
A7YWE4	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Bos taurus OX=9913 GN=ALDH4A1 PE=2 SV=1
P30038	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=ALDH4A1 PE=1 SV=3
Q8CHT0	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Aldh4a1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00171	Aldedh	Aldehyde dehydrogenase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005931	Family	Delta-1-pyrroline-5-carboxylate dehydrogenase	Interproscan
IPR016161	Homologous_superfamily	Aldehyde/histidinol dehydrogenase	Interproscan
IPR016163	Homologous_superfamily	Aldehyde dehydrogenase, C-terminal	Interproscan
IPR029510	Conserved_site	Aldehyde dehydrogenase, glutamic acid active site	Interproscan
IPR016160	Conserved_site	Aldehyde dehydrogenase, cysteine active site	Interproscan
IPR016162	Homologous_superfamily	Aldehyde dehydrogenase, N-terminal	Interproscan
IPR050485	Family	Proline metabolism enzyme	Interproscan
IPR015590	Domain	Aldehyde dehydrogenase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42862	DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 1, ISOFORM A-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003842	Molecular Function	1-pyrroline-5-carboxylate dehydrogenase activity	Interproscan
GO:0010133	Biological Process	proline catabolic process to glutamate	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016620	Molecular Function	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	Interproscan
GO:0005759	Cellular Component	mitochondrial matrix	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00294	E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase	EC:1.2.1.88	Arginine and proline metabolism	ko00330	deepkoala