Genomic Location: sc0000004_pilon:1475197...1492401
NR annotation: PFX12490.1, Transposon Ty3-G Gag-Pol polyprotein [Stylophora pistillata]
| CDS | |||||
| aten_s0004.g80.t1 | |||||
| Transcript |
| aten_s0004.g80.t1 |
| Protein |
| aten_s0004.g80.t1 |
| Uniprot term | Description |
|---|---|
| P27502 | Polyprotein P3 OS=Rice tungro bacilliform virus (isolate Philippines) OX=10655 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF13176 | TPR_7 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF13424 | TPR_12 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF13181 | TPR_8 | Tetratricopeptide repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019734 | Repeat | Tetratricopeptide repeat | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR052386 | Family | G-protein-signaling modulator | Interproscan |
| IPR043128 | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45954 | LD33695P | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0000132 | Biological Process | establishment of mitotic spindle orientation | Interproscan |
| GO:0001965 | Molecular Function | G-protein alpha-subunit binding | Interproscan |
| GO:0005092 | Molecular Function | GDP-dissociation inhibitor activity | Interproscan |
| GO:0005938 | Cellular Component | cell cortex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K15837 | GPSM2; G-protein signaling modulator 2 | - | Cilium and associated proteins | ko03037 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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