Detailed information of aten_s0005.g235.t1 in Acropora tenuis

Genomic Location: sc0000005_pilon:2433282...2446494
NR annotation: XP_029190262.2, growth hormone-regulated TBC protein 1-A-like [Acropora millepora]
Species abbreviation ATENU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6GLZ0Growth hormone-regulated TBC protein 1 OS=Xenopus laevis OX=8355 GN=grtp1 PE=2 SV=1
P48566GTPase-activating protein GYP3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MSB3 PE=1 SV=1
Q92738USP6 N-terminal-like protein OS=Homo sapiens OX=9606 GN=USP6NL PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005691 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00566
all species →		RabGAP-TBCRab-GTPase-TBC domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000195
all species →		DomainRab-GAP-TBC domainInterproscan
IPR050302
all species →		FamilyRab GTPase-activating TBC domain-containing proteinInterproscan
IPR035969
all species →		Homologous_superfamilyRab-GAP-TBC domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47219
all species →		RAB GTPASE-ACTIVATING PROTEIN 1-LIKEInterproscan

 Gene Ontology
No Gene Ontology signature was detected for aten_s0005.g235.t1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for aten_s0005.g235.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP