Detailed information of aten_s0027.g91.t1 in Acropora tenuis

Genomic Location: sc0000027_pilon:1567317...1592822
NR annotation: XP_029186161.2, peroxisome biogenesis factor 1-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3MHM5Tubulin beta-4B chain OS=Bos taurus OX=9913 GN=TUBB4B PE=1 SV=1
P68371Tubulin beta-4B chain OS=Homo sapiens OX=9606 GN=TUBB4B PE=1 SV=1
P68372Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00091TubulinTubulin/FtsZ family, GTPase domainDomainInterproscan
PF03953Tubulin_CTubulin C-terminal domainDomainInterproscan
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan
PF09262PEX-1NPeroxisome biogenesis factor 1, N-terminal DomainInterproscan
PF17862AAA_lid_3AAA+ lid domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003008DomainTubulin/FtsZ, GTPase domainInterproscan
IPR000217FamilyTubulinInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003960Conserved_siteATPase, AAA-type, conserved siteInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR017975Conserved_siteTubulin, conserved siteInterproscan
IPR036525Homologous_superfamilyTubulin/FtsZ, GTPase domain superfamilyInterproscan
IPR002453FamilyBeta tubulinInterproscan
IPR009010Homologous_superfamilyAspartate decarboxylase-like domain superfamilyInterproscan
IPR029067Homologous_superfamilyCDC48 domain 2-like superfamilyInterproscan
IPR018316DomainTubulin/FtsZ, 2-layer sandwich domainInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR015342DomainPeroxisomal ATPase PEX1, N-terminal C-lobeInterproscan
IPR008280Homologous_superfamilyTubulin/FtsZ, C-terminalInterproscan
IPR041569DomainAAA ATPase, AAA+ lid domainInterproscan
IPR013838Binding_siteBeta tubulin, autoregulation binding siteInterproscan
IPR037103Homologous_superfamilyTubulin/FtsZ-like, C-terminal domainInterproscan
IPR023123Homologous_superfamilyTubulin, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11588TUBULINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005874Cellular ComponentmicrotubuleInterproscan
GO:0007017Biological Processmicrotubule-based processInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005200Molecular Functionstructural constituent of cytoskeletonInterproscan
GO:0005777Cellular ComponentperoxisomeInterproscan
GO:0007031Biological Processperoxisome organizationInterproscan
GO:0000226Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0000278Biological Processmitotic cell cycleInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13338PEX1; peroxin-1-Membrane traffickingko04131deepkoala

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