Gene detail

Detailed information of aten_s0030.g133.t1 in Acropora tenuis

Genomic Location: sc0000030_pilon:1889316...1893703
NR annotation: XP_029207091.1, homeobox protein MSX-2-like [Acropora millepora]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
P10181	Homeobox protein rough OS=Drosophila melanogaster OX=7227 GN=ro PE=2 SV=4
P18264	Homeobox protein rough OS=Drosophila virilis OX=7244 GN=ro PE=3 SV=2
P52953	Homeobox protein MSX-2 (Fragment) OS=Rattus norvegicus OX=10116 GN=Msx2 PE=3 SV=1

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020479	Domain	Homeobox domain, metazoa	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR000047	Conserved_site	Helix-turn-helix motif	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45664	PROTEIN ZERKNUELLT 1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09362	K09362; homeo domain only family, other	-	Transcription factors	ko03000	deepkoala