Gene detail

Detailed information of aten_s0049.g92.t1 in Acropora tenuis

Genomic Location: sc0000049_pilon:1229877...1233495
NR annotation: XP_044181449.1, E3 ubiquitin-protein ligase SHPRH-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q149N8	E3 ubiquitin-protein ligase SHPRH OS=Homo sapiens OX=9606 GN=SHPRH PE=1 SV=2
Q7TPQ3	E3 ubiquitin-protein ligase SHPRH OS=Mus musculus OX=10090 GN=Shprh PE=1 SV=1
Q9UTL9	Uncharacterized ATP-dependent helicase C144.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC144.05 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00271	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR052583	Family	ATP-dependent Helicase/E3 Ubiquitin Ligase	Interproscan
IPR049730	Domain	SNF2/RAD5-like, C-terminal helicase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45865	E3 UBIQUITIN-PROTEIN LIGASE SHPRH FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000209	Biological Process	protein polyubiquitination	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006974	Biological Process	DNA damage response	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan