Gene detail

Detailed information of aten_s0057.g29.t1 in Acropora tenuis

Genomic Location: sc0000057_pilon:848198...877880
NR annotation: XP_015778242.1, PREDICTED: uncharacterized protein LOC107356115 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aten_s0057.g29.t1

ACTTAATTTTGTTCATTTGAATCGATTCATTGTTTTAATTTGTTTAATCTTCGATTTTCTTATATTTACCTGGATGAGCAACATGACATGAAATCTACTGAATGTGAATGCCCAAGAGGAGCGTACAAGTGCAGTCACGCTGCTCCACTTTTTGTTCAAGGTATTCATAATCTTAGCCGCACTGATGTCGAATGTCAGTGGAGGAAAAGAAAATCAAGCGCTACTTTATCTTCACAAGCCGTGTCAGAGATGTTTCCTCCACCTAAGAAGTGTACGCCGTTATCAAGAAAGCCAACCGATATTGACCACGCTGAGCTTTACAAAGATTTGAAGGAGTATGGAAGGTTTACAGGCCTTTGTTGGCTCCTGAGCCCACCTGTTTTCTCTGAAGAGTTTCTTAAAACTAGAGGGCTTCAAGAGAGCTGTTTGGTTCGTCGCTGCAGAATATCAAGCGAAGACATAGCAAAAATCAATGACTTAACGGTTGGCCAACGTGATAACCCTGCCTGGCATTTAACCAGAAAGGGCCACCTAACCGCTAGCAACTTTGGTGTTGTCTTCAAGGCAAAACGAGTTACTCTGTCACTTCTTAAATGGCTTTTGGGAGGGTATGATTTGTCAAGGGTAAAAGCAGTGCCATGGGGAGTAAATAATGAAGAAGAAGCCATCAAGGCATTTACTGCCAAGACAGGGAAAAGTGTGGAAGACACTGGGATTTGGTCCCATTCCTCTGGAATTGTTGATGCTTCTCCAGATGGCACTGTTGATGATCAAACTGTTCTTGAAGCCAAATGCCCTTACACTGAGCCTAGCATGACCATTGAGGAAGCAGTCCAATCATCAGCAACCTTTTCTCTTGAGAAATGTGAAAGTGAACAGTGCTACACCTTGAAGAAAGATCATATATACTGGCACCAGGTTCAAGGAAAAATGGATTTTTCCCCCAAAATTTTTTTTTGACAATACTGCTGTTATAAGAATTGAAAGAGACTACACTTGGGCAGCTAATATTCCCCTTTTGACACAATTTTAATTTAATCATATTTTTCCCAAAGCAGTTGATGGGGAATTGTAGATTTCAGTTTTCAGTGTTGTATTATAGACTCATGGGCTCATCCTGAATTGTTTGATTTTATTTAAAACACAATTGACTTTCTCATGCTACAGGTTTTTCTTTGAGCATATTAAGCACTTTAAAGGCACAATAATAAAGAAAGTTGATTGAAATAAACAGGACACCAACAAAGGGATTTCGCCTTAAATGTATTTACTCTAATATTGTTTCAAGTATGAGGAAGCACCTTAAGTGGGATTTAAGGCAAAAAGCTGTAATACTGTAACATACTGGTACATATGATTTCAAGTTAATAAACTAGGATTGTTAGTCGTTGTTGCTGTTTTTCTTTTTTCTGTGGGCATATATTATTGTTGATAAAATCTGAACATTTGGGCTAATCATAGTTCGAGCCATTCAGGCCTAGTAAATGCATACCTTCACAGTTGAATATCAATGATTAATAAATAATTAATAAAAAGGATTGTGAAGATAAAAACTATGGCATTTGAATAACAACAATAATAATAATAATCAGAGAAATTATTTGTTGAATTATTCAAAGACCATATCTTCACATCCCTCTGTGATCAATGGAAATTGCAAATTAGCAAGAGCAGCACGCAATTGAAAAAGTGTATCAGCATAACATCGCAAATAGGATGGAATGAAAATTAAAATTCTGTAGTCTTTTGGTCTTGTATTGGCTCTTTTCACATGGATTCGGCATTTGGCTATGGCCTTGGTGGACTTGATCTCACTCTCTGAAAATGTTCCATTGTTCAAAAATAGTGGGATGTTAACAGAGATGCCATGTGGCAAAATGTCATGAATTACGATACCTTTGTCTGCTAGGATCATGTCTCTTGCTGCCAAGTATTTAAGTAGACCTTATTGTTGGACAATGGCCTTGTCAGAAATGGATCCAGGGTATAACTTACTGACATAGTGCATTCGAAAGGCACCAGTTGGCCCTTGAACGCGAAAGAGAAAGTATCCAGGTTTTCATTGAATCATTGACAGTGGATCAACGCAACAGACTTCTGCTTGAAGTGTTATGCACGGGGCGAGGAAGTCTTGAATATGCAAGGAGCTGGTGAATAGCGAGGACCCTGAACCTGACACACCAATTTGCTAATATGGCACACCAGGCTGGTGTGTCTGTAACGTCTGTGTTGATATGGCCAGCGAAGAAGAGAATAAATGCTGTGGGAAGAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09588	YqaJ	YqaJ-like viral recombinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011335	Homologous_superfamily	Restriction endonuclease type II-like	Interproscan
IPR011604	Homologous_superfamily	PD-(D/E)XK endonuclease-like domain superfamily	Interproscan
IPR019080	Domain	YqaJ viral recombinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR39953	RE54151P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24611	AMMECR1, AMMECR1L; AMME syndrome candidate gene 1 protein	-	Signaling proteins	-	deepkoala