Detailed information of aten_s0065.g89.t1 in Acropora tenuis

Genomic Location: sc0000065_pilon:1100499...1104787
NR annotation: XP_044175702.1, collagen triple helix repeat-containing protein 1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050149FamilyCollagen superfamilyInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24023COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0006910Biological Processphagocytosis, recognitionInterproscan
GO:0030169Molecular Functionlow-density lipoprotein particle bindingInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0038187Molecular Functionpattern recognition receptor activityInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K25700CTHRC1; collagen triple helix repeat-containing protein 1-Cilium and associated proteinsko03037deepkoala

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