Detailed information of aten_s0079.g6.t1 in Acropora tenuis

Genomic Location: sc0000079_pilon:77416...93240
NR annotation: XP_044173664.1, uncharacterized protein LOC114963510 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B0UYI1Transcription elongation factor A N-terminal and central domain-containing protein 2 OS=Danio rerio OX=7955 GN=tceanc2 PE=3 SV=1
Q5XIC7Transcription elongation factor A N-terminal and central domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Tceanc2 PE=2 SV=1
A5PKE4Transcription elongation factor A N-terminal and central domain-containing protein 2 OS=Bos taurus OX=9913 GN=TCEANC2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00622SPRYSPRY domainFamilyInterproscan
PF15711ILEIInterleukin-like EMT inducerDomainInterproscan
PF08711Med26TFIIS helical bundle-like domainDomainInterproscan
PF07500TFIIS_MTranscription factor S-II (TFIIS), central domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043136Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan
IPR036575Homologous_superfamilyTranscription elongation factor S-II, central domain superfamilyInterproscan
IPR001870DomainB30.2/SPRY domainInterproscan
IPR003877DomainSPRY domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR039477DomainILEI/PANDER domainInterproscan
IPR045129FamilyE3 ubiquitin-protein ligase RNF123/RSPRY1-likeInterproscan
IPR003617DomainTranscription elongation factor, TFIIS/CRSP70, N-terminal, sub-typeInterproscan
IPR017923DomainTranscription factor IIS, N-terminalInterproscan
IPR003618DomainTranscription elongation factor S-II, central domainInterproscan
IPR035441Homologous_superfamilyTFIIS/LEDGF domain superfamilyInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13363RING FINGER AND SRY DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0051603Biological Processproteolysis involved in protein catabolic processInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

TOP