Genomic Location: sc0000165_pilon:33316...52425
NR annotation: XP_044172625.1, LOW QUALITY PROTEIN: chondroitin sulfate ABC exolyase-like [Acropora millepora]
| CDS | ||||
| aten_s0165.g3.t1 | ||||
| Transcript |
| aten_s0165.g3.t1 |
| Protein |
| aten_s0165.g3.t1 |
| Uniprot term | Description | |||
|---|---|---|---|---|
| C5G6D7 | Chondroitin sulfate ABC exolyase OS=Bacteroides thetaiotaomicron OX=818 GN=chonabc PE=1 SV=2 | |||
| Q8A2I1 | Chondroitin sulfate ABC exolyase OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=chonabc PE=1 SV=1 | |||
| P59807 | Chondroitin sulfate ABC endolyase OS=Proteus vulgaris OX=585 PE=1 SV=2 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | THAP |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02278 | Lyase_8 | Polysaccharide lyase family 8, super-sandwich domain | Family | Interproscan |
| PF09093 | Lyase_catalyt | Lyase, catalytic | Repeat | Interproscan |
| PF05485 | THAP | THAP domain | Domain | Interproscan |
| PF13613 | HTH_Tnp_4 | Helix-turn-helix of DDE superfamily endonuclease | Domain | Interproscan |
| PF09092 | Lyase_N | Lyase, N terminal | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR014718 | Homologous_superfamily | Glycoside hydrolase-type carbohydrate-binding | Interproscan |
| IPR011071 | Homologous_superfamily | Polysaccharide lyase family 8-like, C-terminal | Interproscan |
| IPR003159 | Domain | Polysaccharide lyase family 8, central domain | Interproscan |
| IPR006612 | Domain | THAP-type zinc finger | Interproscan |
| IPR015177 | Domain | Lyase, catalytic | Interproscan |
| IPR008979 | Homologous_superfamily | Galactose-binding-like domain superfamily | Interproscan |
| IPR011013 | Homologous_superfamily | Galactose mutarotase-like domain superfamily | Interproscan |
| IPR039174 | Family | Chondroitin sulfate ABC lyase | Interproscan |
| IPR008929 | Homologous_superfamily | Chondroitin AC/alginate lyase | Interproscan |
| IPR027805 | Domain | Transposase, Helix-turn-helix domain | Interproscan |
| IPR015176 | Domain | Lyase, N-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR37322 | - | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0030246 | Molecular Function | carbohydrate binding | Interproscan |
| GO:0005975 | Biological Process | carbohydrate metabolic process | Interproscan |
| GO:0005576 | Cellular Component | extracellular region | Interproscan |
| GO:0016829 | Molecular Function | lyase activity | Interproscan |
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0006027 | Biological Process | glycosaminoglycan catabolic process | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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