Gene detail

Detailed information of aten_s0166.g14.t1 in Acropora tenuis

Genomic Location: sc0000166_pilon:159526...181212
NR annotation: XP_044179690.1, uncharacterized protein LOC122961169 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

aten_s0166.g14.t1

ATGGCATCTAAAGTCTTGAAGTCAAAGACTTCTAGACCTGTCAACCTTGTAGTGAGCCATGGTAATGGATCAGCCCTGGTTTCCAGGCAGCCACTGGAATTCACCCCAGAAAGGCAAAAGCAGGCTGAGAGTCCTGACCAGCAGGACACTCCAGAGTCAGTTGAGAAGGATGAAACAGAAAATGCCCGTGACATCAAGGAAGGCCTGGAATCACCACCTGCTATGGACTGTACTAGAGTAGCCGTTTGCAAAACCGACTCGAGCAAAGTATGCCCTGGTATTGCAAACAATGAGATTACTGGTATCATAAAGTTTAACAATTTTTCCTATGACGAGGGTTGCGTAAGGGTCTGGCAAGCGTACGGAATCGTTGAAGGAGTGTATTTCGATGAATTTGAAGCTAAACACGATGTGTCCGGGCTCGAGCAGGATGGGGAGTGGTCGGCAGCAGTCGAGAAGCAGAGAAAACAGGCAAGACCCAAGTCAAATGGAAGCACAAGAGATCCTGGTAGCACCTACTCATGCTTGGATCCTGCATGTATCCTGACTTTTGATTCAATTCAAGATGCAGAGGACCATATGGATACAGGTGAACATGTGTTTACTCCAGAGAACGAGCAGATATACGATACGGTGAGAAGGCAGTGGGCAGCAGTTTCGACAACAGTAAAGGGAAAGAATGAGAAGATAGGGGAGGCGGCATATGGAGAGGGACAAGGATCAGGGGCAACAAAAGGCTGGGCACTTAAAAAACAGAAAGCTGCCATGAAAGCCAAAGAAAAAGCAAAAGCATCGGGAATAGATACAGAGATGAATGAATTAGATGTTTTACTTGAGGAGATTGTGGAAAAAGATGAAGAGTTTGATAAAGATCAGTCCGAGCACAAGGCAAAAGAAGACCAAAGTAAAGCTGAAGCCAACGACATGAGGCTAAAGGCGATGGAAAGCTTAAAAGAGAGTAAGAAAAGAAGGTCTGAAGAACATGAAAAGCAGTTGCCTAAGAAGAAAAGAGGCTCAGAAGCGTTCGATTATCTGAGAAAAAAAATGGATGGTGATAAATACCTGAGGGAAAAAGAATTAGAGATTAAAGTGAAAGAGCAGGAGAGAGATGAACAATGGCAAAAGTTGGTGGAAGATCAACACAAAGACACGATGGCAATGATGAATCGACAACAACAAGAAATACAACAAATGCAAATGAGGTTTTTCGAACAACAACAGCAGCAAAACAACCTACTTCTCGCTTTATTTCAGAAAGCTCTGACGAAGCATTCTACAGATGAAGAAATATATCAGAGCAACAGTGGGAGTGATCAGGATACTTCCAACATCACAGGACTTACTATCAAAACAACCAACATCAGTTATACCAGTACTAGTAGTACTGCTAGTAGTCCCTCAGTTAGTGGTGGATCCAGCACTAGTAGCAGTAGCTACAGCCTTCCACAGACAGATGATGTCAGCACCAGCATAGCCTTTTTCAAGAAAAGGGATTATGACATCAACAAACCTGTTGTCGTCTCTTTTGAGGGTGAGGCGGTGGTCGATGGTGGTGGACCTGACAGGGAGTACTTCACTCTACTTCTCAAGTCTATTCTTTCACCATGCCCACAAATCAAGTTGTTTGAAGGTACCAGTTCTATTGTGCAAGCACTGCACAACACAGATGCCTTAAGAGCAAGCATGTTTAAAGTGGCTGGTAGAATGATAGCTGCAAGCATAGTCAATGGTGGACCATCCTTCCCATACCTGTCACCAGCAGTATACAAGTATTTGACATCAAAAAGCACTGAAAACGTTCTTCCTGACATAACAAGGAGTGATGTTGTGAACTATGAAGTCCTTCAGGCAATTGATGAGGTGGTAATTTTTAGTATTCTCAGTATATTGATAACAGATCATCTAATCCAAACCTTTTTTTTTGGTACAGCTGACAGATTGCCAAGTCTCTTAATGTTCTGCAATGGGGTGAATCAAATACCACCATTAGGGTTTCACAGTCCTGATAAAATAGCTGTGCTGCAGCTTCAGCCTGAATGTGGACCCCTTCCAAATGCCAATACATGTCCCCAGGAACTGGATCTACTGTGCATGCATGACAAGTTTGAGGATTTTAAAGAAAGCTTAAACAAAGCTTTGGACATCCAAGGCAGTGGTTTTGGTATAGTGTAA

Transcript

aten_s0166.g14.t1

GGCAAATGAAAAGAGGACAAAGAAGATAACAGAAAAAGTTCAACCAGCTTCTGACCGGCCTATCAAGCCAATCAGCATTAATCACGCTACTCTAGAAAGTGGAAATGTCGTCCACATATTACAGGAAATGTTTGCCAAATCAATGAGAGAGATTCATGAAAGGTTTGACAGCATGGGAAAGCAATCCAAGCCCTCACAGAACAAAAAAAGGCAACAGAGAAAAAAATAGAGGAAGTCATGGCATCTAAAGTCTTGAAGTCAAAGACTTCTAGACCTGTCAACCTTGTAGTGAGCCATGGTAATGGATCAGCCCTGGTTTCCAGGCAGCCACTGGAATTCACCCCAGAAAGGCAAAAGCAGGCTGAGAGTCCTGACCAGCAGGACACTCCAGAGTCAGTTGAGAAGGATGAAACAGAAAATGCCCGTGACATCAAGGAAGGCCTGGAATCACCACCTGCTATGGACTGTACTAGAGTAGCCGTTTGCAAAACCGACTCGAGCAAAGTATGCCCTGGTATTGCAAACAATGAGATTACTGGTATCATAAAGTTTAACAATTTTTCCTATGACGAGGGTTGCGTAAGGGTCTGGCAAGCGTACGGAATCGTTGAAGGAGTGTATTTCGATGAATTTGAAGCTAAACACGATGTGTCCGGGCTCGAGCAGGATGGGGAGTGGTCGGCAGCAGTCGAGAAGCAGAGAAAACAGGCAAGACCCAAGTCAAATGGAAGCACAAGAGATCCTGGTAGCACCTACTCATGCTTGGATCCTGCATGTATCCTGACTTTTGATTCAATTCAAGATGCAGAGGACCATATGGATACAGGTGAACATGTGTTTACTCCAGAGAACGAGCAGATATACGATACGGTGAGAAGGCAGTGGGCAGCAGTTTCGACAACAGTAAAGGGAAAGAATGAGAAGATAGGGGAGGCGGCATATGGAGAGGGACAAGGATCAGGGGCAACAAAAGGCTGGGCACTTAAAAAACAGAAAGCTGCCATGAAAGCCAAAGAAAAAGCAAAAGCATCGGGAATAGATACAGAGATGAATGAATTAGATGTTTTACTTGAGGAGATTGTGGAAAAAGATGAAGAGTTTGATAAAGATCAGTCCGAGCACAAGGCAAAAGAAGACCAAAGTAAAGCTGAAGCCAACGACATGAGGCTAAAGGCGATGGAAAGCTTAAAAGAGAGTAAGAAAAGAAGGTCTGAAGAACATGAAAAGCAGTTGCCTAAGAAGAAAAGAGGCTCAGAAGCGTTCGATTATCTGAGAAAAAAAATGGATGGTGATAAATACCTGAGGGAAAAAGAATTAGAGATTAAAGTGAAAGAGCAGGAGAGAGATGAACAATGGCAAAAGTTGGTGGAAGATCAACACAAAGACACGATGGCAATGATGAATCGACAACAACAAGAAATACAACAAATGCAAATGAGGTTTTTCGAACAACAACAGCAGCAAAACAACCTACTTCTCGCTTTATTTCAGAAAGCTCTGACGAAGCATTCTACAGATGAAGAAATATATCAGAGCAACAGTGGGAGTGATCAGGATACTTCCAACATCACAGGACTTACTATCAAAACAACCAACATCAGTTATACCAGTACTAGTAGTACTGCTAGTAGTCCCTCAGTTAGTGGTGGATCCAGCACTAGTAGCAGTAGCTACAGCCTTCCACAGACAGATGATGTCAGCACCAGCATAGCCTTTTTCAAGAAAAGGGATTATGACATCAACAAACCTGTTGTCGTCTCTTTTGAGGGTGAGGCGGTGGTCGATGGTGGTGGACCTGACAGGGAGTACTTCACTCTACTTCTCAAGTCTATTCTTTCACCATGCCCACAAATCAAGTTGTTTGAAGGTACCAGTTCTATTGTGCAAGCACTGCACAACACAGATGCCTTAAGAGCAAGCATGTTTAAAGTGGCTGGTAGAATGATAGCTGCAAGCATAGTCAATGGTGGACCATCCTTCCCATACCTGTCACCAGCAGTATACAAGTATTTGACATCAAAAAGCACTGAAAACGTTCTTCCTGACATAACAAGGAGTGATGTTGTGAACTATGAAGTCCTTCAGGCAATTGATGAGGTGGTAATTTTTAGTATTCTCAGTATATTGATAACAGATCATCTAATCCAAACCTTTTTTTTTGGTACAGCTGACAGATTGCCAAGTCTCTTAATGTTCTGCAATGGGGTGAATCAAATACCACCATTAGGGTTTCACAGTCCTGATAAAATAGCTGTGCTGCAGCTTCAGCCTGAATGTGGACCCCTTCCAAATGCCAATACATGTCCCCAGGAACTGGATCTACTGTGCATGCATGACAAGTTTGAGGATTTTAAAGAAAGCTTAAACAAAGCTTTGGACATCCAAGGCAGTGGTTTTGGTATAGTGTAATTTTGTTCCAACTTTGTTGGCAGCTTCTTTTACAAGGAGACCACAGTTTATTGTTGTGTTAAATTAAGTATTTAAGAGTGA

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity\|HECT

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00632	HECT	HECT-domain (ubiquitin-transferase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000569	Domain	HECT domain	Interproscan
IPR035983	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33845	C2H2-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan