Detailed information of aten_s0197.g50.t1 in Acropora tenuis

Genomic Location: sc0000197_pilon:533162...556352
NR annotation: XP_044162782.1, nuclear export mediator factor NEMF-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O60524Ribosome quality control complex subunit NEMF OS=Homo sapiens OX=9606 GN=NEMF PE=1 SV=4
Q8CCP0Ribosome quality control complex subunit NEMF OS=Mus musculus OX=10090 GN=Nemf PE=1 SV=2
Q9VBX1Ribosome quality control complex subunit NEMF homolog OS=Drosophila melanogaster OX=7227 GN=Clbn PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05670NFACT-R_1NFACT protein RNA binding domainDomainInterproscan
PF11923NFACT-CNFACT protein C-terminal domainDomainInterproscan
PF05833NFACT_NNFACT N-terminal and middle domainsFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008532DomainNFACT, RNA-binding domainInterproscan
IPR021846DomainNFACT protein, C-terminalInterproscan
IPR051608FamilyRibosome Quality Control Complex Subunit NEMFInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15239NUCLEAR EXPORT MEDIATOR FACTOR NEMFInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0043023Molecular Functionribosomal large subunit bindingInterproscan
GO:0072344Biological Processrescue of stalled ribosomeInterproscan
GO:1990112Cellular ComponentRQC complexInterproscan
GO:1990116Biological Processribosome-associated ubiquitin-dependent protein catabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24971NEMF, RQC2; nuclear export mediator factor NEMF-Ribosome biogenesisko03009deepkoala

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